RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
DENND3-220ENST00000523066 PI16Q6UXB8 463 aa12.96□□□□□ -0.33
DENND3-220ENST00000523066 DNAJC5GQ8N7S2 189 aa12.96□□□□□ -0.33
DENND3-220ENST00000523066 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
DENND3-220ENST00000523066 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.33
DENND3-220ENST00000523066 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
DENND3-220ENST00000523066 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.34
DENND3-220ENST00000523066 CLRN2A0PK11 232 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
DENND3-220ENST00000523066 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
DENND3-220ENST00000523066 DLGAP5Q15398 846 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 EAF2Q96CJ1 260 aaPredicted RBP12.95□□□□□ -0.34
DENND3-220ENST00000523066 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
DENND3-220ENST00000523066 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
DENND3-220ENST00000523066 PCDHB15Q9Y5E8 787 aa12.95□□□□□ -0.34
DENND3-220ENST00000523066 PRDX5P30044 214 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 CRKP46108 304 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
DENND3-220ENST00000523066 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
DENND3-220ENST00000523066 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
DENND3-220ENST00000523066 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
DENND3-220ENST00000523066 MCAMP43121 646 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 WDR66Q8TBY9 1149 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
DENND3-220ENST00000523066 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
DENND3-220ENST00000523066 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
DENND3-220ENST00000523066 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 SEMA3EO15041 775 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
DENND3-220ENST00000523066 HMMRO75330 724 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
DENND3-220ENST00000523066 DIXDC1Q155Q3 683 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 TBC1D9Q6ZT07 1266 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 AACSQ86V21 672 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
DENND3-220ENST00000523066 CACNB3P54284 484 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 TTC39AQ5SRH9 613 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 SPATA5Q8NB90 893 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
DENND3-220ENST00000523066 FZD1Q9UP38 647 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 NDUFB9Q9Y6M9 179 aa12.91□□□□□ -0.34
DENND3-220ENST00000523066 SALL1Q9NSC2 1324 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
DENND3-220ENST00000523066 MMP14P50281 582 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
DENND3-220ENST00000523066 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
DENND3-220ENST00000523066 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 KIF1BPQ96EK5 621 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 DAGLAQ9Y4D2 1042 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 TLL2Q9Y6L7 1015 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 CNTNAP1P78357 1384 aa12.9□□□□□ -0.34
DENND3-220ENST00000523066 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 ZAP70P43403 619 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 VEGFBP49765 207 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 HDLBPQ00341 1268 aaKnown RBP12.89□□□□□ -0.35
DENND3-220ENST00000523066 GRM1Q13255 1194 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 PRKG1Q13976 671 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 CCDC158Q5M9N0 1113 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 SAPCD2Q86UD0 394 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
DENND3-220ENST00000523066 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 SUGT1Q9Y2Z0 365 aa12.89□□□□□ -0.35
DENND3-220ENST00000523066 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 MYO1BO43795 1136 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
DENND3-220ENST00000523066 CYP4F22Q6NT55 531 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
DENND3-220ENST00000523066 CLASRPQ8N2M8 674 aaKnown RBP12.88□□□□□ -0.35
DENND3-220ENST00000523066 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
DENND3-220ENST00000523066 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 MAST3O60307 1309 aa12.88□□□□□ -0.35
DENND3-220ENST00000523066 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
DENND3-220ENST00000523066 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 MECOMQ03112 1051 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 RASA3Q14644 834 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms