RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 MS4A4AQ96JQ5 239 aa19.34■□□□□ 0.69
TRAPPC9-213ENST00000522504 TMEM39BQ9GZU3 492 aa19.34■□□□□ 0.69
TRAPPC9-213ENST00000522504 LAMB1P07942 1786 aa19.34■□□□□ 0.69
TRAPPC9-213ENST00000522504 TCP10L2B9ZVM9 353 aa19.33■□□□□ 0.68
TRAPPC9-213ENST00000522504 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.68
TRAPPC9-213ENST00000522504 IQSEC3Q9UPP2 1182 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC9-213ENST00000522504 PTPN22Q9Y2R2 807 aa19.33■□□□□ 0.68
TRAPPC9-213ENST00000522504 CRKP46108 304 aa19.32■□□□□ 0.68
TRAPPC9-213ENST00000522504 FBXO33Q7Z6M2 555 aa19.32■□□□□ 0.68
TRAPPC9-213ENST00000522504 BRI3BPQ8WY22 251 aa19.32■□□□□ 0.68
TRAPPC9-213ENST00000522504 OTOFQ9HC10 1997 aa19.32■□□□□ 0.68
TRAPPC9-213ENST00000522504 TNFAIP1Q13829 316 aa19.31■□□□□ 0.68
TRAPPC9-213ENST00000522504 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
TRAPPC9-213ENST00000522504 ERO1AQ96HE7 468 aa19.31■□□□□ 0.68
TRAPPC9-213ENST00000522504 UTYO14607 1347 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 CACNB3P54284 484 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 SP3Q02447 781 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 VGLL4Q14135 290 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 OTUD7BQ6GQQ9 843 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 ANKRD44Q8N8A2 993 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 EFCC1Q9HA90 598 aa19.3■□□□□ 0.68
TRAPPC9-213ENST00000522504 KIAA0100Q14667 2235 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-213ENST00000522504 CHAF1AQ13111 956 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC9-213ENST00000522504 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-213ENST00000522504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAPPC9-213ENST00000522504 ARMC5Q96C12 935 aa19.29■□□□□ 0.68
TRAPPC9-213ENST00000522504 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 EN2P19622 333 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 MAP3K9P80192 1104 aa19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 RABL6Q3YEC7 729 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 FAM43AQ8N2R8 423 aa19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 VGLL2Q8N8G2 317 aa19.28■□□□□ 0.68
TRAPPC9-213ENST00000522504 CCL15-CCL14A0A0B4J2E2 113 aa19.27■□□□□ 0.68
TRAPPC9-213ENST00000522504 CCL15Q16663 113 aa19.27■□□□□ 0.68
TRAPPC9-213ENST00000522504 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
TRAPPC9-213ENST00000522504 BCAMP50895 628 aa19.26■□□□□ 0.67
TRAPPC9-213ENST00000522504 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
TRAPPC9-213ENST00000522504 VPS37DQ86XT2 251 aa19.26■□□□□ 0.67
TRAPPC9-213ENST00000522504 OTUD5Q96G74 571 aa19.26■□□□□ 0.67
TRAPPC9-213ENST00000522504 ARAP2Q8WZ64 1704 aa19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 ANP32CO43423 234 aa19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 GTF2A2P52657 109 aa19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 TAF1CQ15572 869 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 APOBEC3HQ6NTF7 200 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
TRAPPC9-213ENST00000522504 PDE8BO95263 885 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 TNNI2P48788 182 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 HDLBPQ00341 1268 aaKnown RBP19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 FAM9BQ8IZU0 186 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 ZKSCAN4Q969J2 545 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 TEKT1Q969V4 418 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 CSADQ9Y600 493 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 PTCH2Q9Y6C5 1203 aa19.24■□□□□ 0.67
TRAPPC9-213ENST00000522504 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
TRAPPC9-213ENST00000522504 ZNF333Q96JL9 665 aa19.23■□□□□ 0.67
TRAPPC9-213ENST00000522504 ZDHHC15Q96MV8 337 aa19.23■□□□□ 0.67
TRAPPC9-213ENST00000522504 ARHGAP39Q9C0H5 1083 aa19.23■□□□□ 0.67
TRAPPC9-213ENST00000522504 ZFYVE28Q9HCC9 887 aa19.23■□□□□ 0.67
TRAPPC9-213ENST00000522504 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 FGFR2P21802 821 aa19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 TBC1D22AQ8WUA7 517 aa19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 WRNIP1Q96S55 665 aa19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 USP44Q9H0E7 712 aa19.22■□□□□ 0.67
TRAPPC9-213ENST00000522504 BTBD19C9JJ37 291 aa19.21■□□□□ 0.67
TRAPPC9-213ENST00000522504 RANBP2P49792 3224 aaKnown RBP19.21■□□□□ 0.67
TRAPPC9-213ENST00000522504 HABP4Q5JVS0 413 aaKnown RBP19.21■□□□□ 0.67
TRAPPC9-213ENST00000522504 RBBP6Q7Z6E9 1792 aaKnown RBP19.2■□□□□ 0.66
TRAPPC9-213ENST00000522504 IRF6O14896 467 aa19.2■□□□□ 0.66
TRAPPC9-213ENST00000522504 FAM83AQ86UY5 434 aa19.2■□□□□ 0.66
TRAPPC9-213ENST00000522504 ERO1BQ86YB8 467 aa19.2■□□□□ 0.66
TRAPPC9-213ENST00000522504 MRIQ9BWK5 157 aa19.2■□□□□ 0.66
TRAPPC9-213ENST00000522504 MYCP01106 439 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 RFX5P48382 616 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 SLC9C1Q4G0N8 1177 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 FKBP1CQ5VVH2 108 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 MIGA2Q7L4E1 593 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 GCC1Q96CN9 775 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 SZT2Q5T011 3432 aa19.19■□□□□ 0.66
TRAPPC9-213ENST00000522504 TLR2O60603 784 aa19.18■□□□□ 0.66
TRAPPC9-213ENST00000522504 CETPP11597 493 aa19.18■□□□□ 0.66
TRAPPC9-213ENST00000522504 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
TRAPPC9-213ENST00000522504 HHIPL2Q6UWX4 724 aa19.18■□□□□ 0.66
TRAPPC9-213ENST00000522504 ZSWIM8A7E2V4 1837 aa19.18■□□□□ 0.66
TRAPPC9-213ENST00000522504 CTGFP29279 349 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 INPP5BP32019 993 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 PPIL2Q13356 520 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 SNAPC2Q13487 334 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 SH3TC2Q8TF17 1288 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 TMEM106CQ9BVX2 250 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 TMOD2Q9NZR1 351 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 SUGT1Q9Y2Z0 365 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 KIF16BQ96L93 1317 aa19.17■□□□□ 0.66
TRAPPC9-213ENST00000522504 ECM2O94769 699 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC9-213ENST00000522504 DIXDC1Q155Q3 683 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms