RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CDC45O75419 566 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 PDE6AP16499 860 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 DACT2Q5SW24 774 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 PCNTO95613 3336 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 CYP7A1P22680 504 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.022e-12■■■■□ 23.8
PABPC1-219ENST00000522387 STRIP1Q5VSL9 837 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 OSBP2Q969R2 916 aa14.92□□□□□ -0.02
PABPC1-219ENST00000522387 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.92□□□□□ -0.02
PABPC1-219ENST00000522387 LTBP3Q9NS15 1303 aa14.91□□□□□ -0.02
PABPC1-219ENST00000522387 MFAP1P55081 439 aaKnown RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 NAA16Q6N069 864 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 ZNF589Q86UQ0 364 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 GRIN3BO60391 1043 aa14.91□□□□□ -0.02
PABPC1-219ENST00000522387 EIF6P56537 245 aaKnown RBP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 CIAPIN1Q6FI81 312 aa14.91□□□□□ -0.02
PABPC1-219ENST00000522387 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
PABPC1-219ENST00000522387 SBF1O95248 1867 aa14.9□□□□□ -0.02
PABPC1-219ENST00000522387 M0R2C6 588 aa14.9□□□□□ -0.02
PABPC1-219ENST00000522387 DDNO94850 711 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-219ENST00000522387 ADD2P35612 726 aa14.9□□□□□ -0.02
PABPC1-219ENST00000522387 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
PABPC1-219ENST00000522387 FAM205AQ6ZU69 1335 aa14.9□□□□□ -0.02
PABPC1-219ENST00000522387 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
PABPC1-219ENST00000522387 CASC1Q6TDU7 716 aa14.89□□□□□ -0.03
PABPC1-219ENST00000522387 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
PABPC1-219ENST00000522387 FZD9O00144 591 aa14.89□□□□□ -0.03
PABPC1-219ENST00000522387 SLC4A8Q2Y0W8 1093 aa14.89□□□□□ -0.03
PABPC1-219ENST00000522387 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
PABPC1-219ENST00000522387 ZGPATQ8N5A5 531 aaKnown RBP14.89□□□□□ -0.03
PABPC1-219ENST00000522387 VPS33BQ9H267 617 aa14.89□□□□□ -0.03
PABPC1-219ENST00000522387 SCAF8Q9UPN6 1271 aaKnown RBP14.89□□□□□ -0.03
PABPC1-219ENST00000522387 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
PABPC1-219ENST00000522387 VPS53Q5VIR6 699 aa14.88□□□□□ -0.03
PABPC1-219ENST00000522387 ARMT1Q9H993 441 aa14.88□□□□□ -0.03
PABPC1-219ENST00000522387 ANO2Q9NQ90 1003 aa14.88□□□□□ -0.03
PABPC1-219ENST00000522387 VIL1P09327 827 aaKnown RBP14.88□□□□□ -0.03
PABPC1-219ENST00000522387 SPTY2D1Q68D10 685 aaPredicted RBP14.88□□□□□ -0.03
PABPC1-219ENST00000522387 MAST3O60307 1309 aa14.88□□□□□ -0.03
PABPC1-219ENST00000522387 MBD4O95243 580 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 EGFRP00533 1210 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 AIDAQ96BJ3 306 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 ESYT1Q9BSJ8 1104 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 SALL1Q9NSC2 1324 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 GMPSP49915 693 aaPredicted RBP14.87□□□□□ -0.03
PABPC1-219ENST00000522387 MCMDC2Q4G0Z9 681 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
PABPC1-219ENST00000522387 PDS5AQ29RF7 1337 aaKnown RBP14.87□□□□□ -0.03
PABPC1-219ENST00000522387 GPAA1O43292 621 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 PRKAB2O43741 272 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 CACNB3P54284 484 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 TNIP1Q15025 636 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 ZSCAN25Q6NSZ9 544 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 ZNF526Q8TF50 670 aaPredicted RBP14.86□□□□□ -0.03
PABPC1-219ENST00000522387 SDR42E1Q8WUS8 393 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 APPBP2Q92624 585 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 ADAMTSL1Q8N6G6 1762 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 APPP05067 770 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 SAMD7Q7Z3H4 446 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 DAXXQ9UER7 740 aaPredicted RBP14.86□□□□□ -0.03
PABPC1-219ENST00000522387 MYH7P12883 1935 aa14.86□□□□□ -0.03
PABPC1-219ENST00000522387 MYH2Q9UKX2 1941 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 SGSM2O43147 1006 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 BTDP43251 543 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 CRKP46108 304 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 PTH1RQ03431 593 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 UBE3CQ15386 1083 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
PABPC1-219ENST00000522387 MAGEB6P1A0A0J9YX57 407 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 HIP1O00291 1037 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 ZFYP08048 801 aaPredicted RBP14.84□□□□□ -0.03
PABPC1-219ENST00000522387 USP17L8P0C7I0 530 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 LRRFIP1Q32MZ4 808 aaKnown RBP14.84□□□□□ -0.03
PABPC1-219ENST00000522387 MICALL2Q8IY33 904 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 DAGLAQ9Y4D2 1042 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
PABPC1-219ENST00000522387 RUFY2Q8WXA3 655 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 TEKT1Q969V4 418 aa14.84□□□□□ -0.03
PABPC1-219ENST00000522387 CNOT7Q9UIV1 285 aaKnown RBP14.84□□□□□ -0.03
PABPC1-219ENST00000522387 CLRN2A0PK11 232 aa14.83□□□□□ -0.03
PABPC1-219ENST00000522387 EPS15P42566 896 aa14.83□□□□□ -0.03
PABPC1-219ENST00000522387 CFAP100Q494V2 611 aa14.83□□□□□ -0.03
PABPC1-219ENST00000522387 SH3RF3Q8TEJ3 882 aaPredicted RBP14.83□□□□□ -0.03
PABPC1-219ENST00000522387 PRMT6Q96LA8 375 aaPredicted RBP14.83□□□□□ -0.03
PABPC1-219ENST00000522387 PICALMQ13492 652 aa14.83□□□□□ -0.04
PABPC1-219ENST00000522387 KIAA1211Q6ZU35 1233 aa14.83□□□□□ -0.04
PABPC1-219ENST00000522387 GMLQ99445 158 aa14.83□□□□□ -0.04
PABPC1-219ENST00000522387 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.04
PABPC1-219ENST00000522387 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
PABPC1-219ENST00000522387 MROH7-TTC4A0A0A0MT08 1334 aa14.83□□□□□ -0.04
PABPC1-219ENST00000522387 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
PABPC1-219ENST00000522387 NBPF9Q3BBW0 867 aa14.82□□□□□ -0.04
PABPC1-219ENST00000522387 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
PABPC1-219ENST00000522387 GPC2Q8N158 579 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms