RNA–Protein interactions for RNA: ENST00000522309.1

RTL8A-204, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 1 (best)

Gene RTL8A, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-204ENST00000522309 MROH5Q6ZUA9 1318 aa21.59■■□□□ 1.05
RTL8A-204ENST00000522309 CRKP46108 304 aa21.59■■□□□ 1.05
RTL8A-204ENST00000522309 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
RTL8A-204ENST00000522309 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
RTL8A-204ENST00000522309 CRHR2Q13324 411 aa21.58■■□□□ 1.05
RTL8A-204ENST00000522309 TNFAIP1Q13829 316 aa21.58■■□□□ 1.05
RTL8A-204ENST00000522309 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.58■■□□□ 1.05
RTL8A-204ENST00000522309 VGLL2Q8N8G2 317 aa21.58■■□□□ 1.05
RTL8A-204ENST00000522309 IQSEC3Q9UPP2 1182 aaPredicted RBP21.58■■□□□ 1.05
RTL8A-204ENST00000522309 TRIM17Q9Y577 477 aa21.58■■□□□ 1.05
RTL8A-204ENST00000522309 TCP10L2B9ZVM9 353 aa21.57■■□□□ 1.04
RTL8A-204ENST00000522309 CAP1Q01518 475 aa21.57■■□□□ 1.04
RTL8A-204ENST00000522309 PRPF38BQ5VTL8 546 aaKnown RBP21.57■■□□□ 1.04
RTL8A-204ENST00000522309 MS4A4AQ96JQ5 239 aa21.57■■□□□ 1.04
RTL8A-204ENST00000522309 TMEM39BQ9GZU3 492 aa21.57■■□□□ 1.04
RTL8A-204ENST00000522309 ELP3Q9H9T3 547 aa21.57■■□□□ 1.04
RTL8A-204ENST00000522309 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
RTL8A-204ENST00000522309 OPTNQ96CV9 577 aa21.56■■□□□ 1.04
RTL8A-204ENST00000522309 PDE8BO95263 885 aa21.55■■□□□ 1.04
RTL8A-204ENST00000522309 KLHDC4Q8TBB5 520 aa21.55■■□□□ 1.04
RTL8A-204ENST00000522309 CD99L2Q8TCZ2 262 aa21.55■■□□□ 1.04
RTL8A-204ENST00000522309 CENPFP49454 3210 aa21.55■■□□□ 1.04
RTL8A-204ENST00000522309 BCAMP50895 628 aa21.54■■□□□ 1.04
RTL8A-204ENST00000522309 HDLBPQ00341 1268 aaKnown RBP21.54■■□□□ 1.04
RTL8A-204ENST00000522309 CHAF1AQ13111 956 aaPredicted RBP21.54■■□□□ 1.04
RTL8A-204ENST00000522309 METTL24Q5JXM2 366 aa21.54■■□□□ 1.04
RTL8A-204ENST00000522309 OTUD7BQ6GQQ9 843 aa21.54■■□□□ 1.04
RTL8A-204ENST00000522309 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
RTL8A-204ENST00000522309 PTPN22Q9Y2R2 807 aa21.54■■□□□ 1.04
RTL8A-204ENST00000522309 MAP3K9P80192 1104 aa21.53■■□□□ 1.04
RTL8A-204ENST00000522309 VPS37DQ86XT2 251 aa21.53■■□□□ 1.04
RTL8A-204ENST00000522309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.53■■□□□ 1.04
RTL8A-204ENST00000522309 BRI3BPQ8WY22 251 aa21.53■■□□□ 1.04
RTL8A-204ENST00000522309 ERO1AQ96HE7 468 aa21.53■■□□□ 1.04
RTL8A-204ENST00000522309 POTEFA5A3E0 1075 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 CACNB3P54284 484 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 VGLL4Q14135 290 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 TBC1D22AQ8WUA7 517 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 MRIQ9BWK5 157 aa21.52■■□□□ 1.04
RTL8A-204ENST00000522309 FGFR2P21802 821 aa21.51■■□□□ 1.03
RTL8A-204ENST00000522309 TNNI2P48788 182 aa21.51■■□□□ 1.03
RTL8A-204ENST00000522309 SP3Q02447 781 aa21.51■■□□□ 1.03
RTL8A-204ENST00000522309 CAVIN4Q5BKX8 364 aa21.51■■□□□ 1.03
RTL8A-204ENST00000522309 PTPRCP08575 1304 aa21.51■■□□□ 1.03
RTL8A-204ENST00000522309 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
RTL8A-204ENST00000522309 RFX5P48382 616 aaPredicted RBP21.5■■□□□ 1.03
RTL8A-204ENST00000522309 APOBEC3HQ6NTF7 200 aaKnown RBP21.5■■□□□ 1.03
RTL8A-204ENST00000522309 TEKT1Q969V4 418 aa21.5■■□□□ 1.03
RTL8A-204ENST00000522309 ZDHHC15Q96MV8 337 aa21.5■■□□□ 1.03
RTL8A-204ENST00000522309 EFCC1Q9HA90 598 aa21.5■■□□□ 1.03
RTL8A-204ENST00000522309 RBBP6Q7Z6E9 1792 aaKnown RBP21.5■■□□□ 1.03
RTL8A-204ENST00000522309 CCL15-CCL14A0A0B4J2E2 113 aa21.49■■□□□ 1.03
RTL8A-204ENST00000522309 FRAT2O75474 233 aaPredicted RBP21.49■■□□□ 1.03
RTL8A-204ENST00000522309 CCL15Q16663 113 aa21.49■■□□□ 1.03
RTL8A-204ENST00000522309 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
RTL8A-204ENST00000522309 FAM43AQ8N2R8 423 aa21.49■■□□□ 1.03
RTL8A-204ENST00000522309 MYH13Q9UKX3 1938 aa21.49■■□□□ 1.03
RTL8A-204ENST00000522309 ZEB1P37275 1124 aaPredicted RBP21.48■■□□□ 1.03
RTL8A-204ENST00000522309 GTF2A2P52657 109 aa21.48■■□□□ 1.03
RTL8A-204ENST00000522309 ARMC5Q96C12 935 aa21.48■■□□□ 1.03
RTL8A-204ENST00000522309 SNCAIPQ9Y6H5 919 aa21.48■■□□□ 1.03
RTL8A-204ENST00000522309 FKBP1CQ5VVH2 108 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 OTUD5Q96G74 571 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 SUGT1Q9Y2Z0 365 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 CSADQ9Y600 493 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 KIF16BQ96L93 1317 aa21.47■■□□□ 1.03
RTL8A-204ENST00000522309 SPDYE5A6NIY4 337 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 EYA2O00167 538 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
RTL8A-204ENST00000522309 TAF1CQ15572 869 aaPredicted RBP21.46■■□□□ 1.03
RTL8A-204ENST00000522309 HHIPL2Q6UWX4 724 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 PCDH10Q9P2E7 1040 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 BRCA2P51587 3418 aa21.46■■□□□ 1.03
RTL8A-204ENST00000522309 E9PSI1 815 aa21.45■■□□□ 1.02
RTL8A-204ENST00000522309 IFIT1P09914 478 aaKnown RBP21.45■■□□□ 1.02
RTL8A-204ENST00000522309 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
RTL8A-204ENST00000522309 ZKSCAN4Q969J2 545 aaPredicted RBP21.45■■□□□ 1.02
RTL8A-204ENST00000522309 ZFYVE28Q9HCC9 887 aa21.45■■□□□ 1.02
RTL8A-204ENST00000522309 ZSWIM8A7E2V4 1837 aa21.44■■□□□ 1.02
RTL8A-204ENST00000522309 ERO1BQ86YB8 467 aa21.44■■□□□ 1.02
RTL8A-204ENST00000522309 AK9Q5TCS8 1911 aa21.44■■□□□ 1.02
RTL8A-204ENST00000522309 EN2P19622 333 aaPredicted RBP21.43■■□□□ 1.02
RTL8A-204ENST00000522309 WRNIP1Q96S55 665 aa21.43■■□□□ 1.02
RTL8A-204ENST00000522309 BTBD19C9JJ37 291 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 IRF6O14896 467 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 MAST3O60307 1309 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 LPIN2Q92539 896 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 CDCA7LQ96GN5 454 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 TMOD2Q9NZR1 351 aa21.42■■□□□ 1.02
RTL8A-204ENST00000522309 CETPP11597 493 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 SLC5A1P13866 664 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 MIGA2Q7L4E1 593 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 ZNF333Q96JL9 665 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 PTCH2Q9Y6C5 1203 aa21.41■■□□□ 1.02
RTL8A-204ENST00000522309 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
RTL8A-204ENST00000522309 TLR2O60603 784 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms