RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 CASP7P55210 303 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
POLB-212ENST00000522297 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 GREM2Q9H772 168 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 GPRC5DQ9NZD1 345 aa11.14□□□□□ -0.63
POLB-212ENST00000522297 PASKQ96RG2 1323 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 RNF40O75150 1001 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 USP50Q70EL3 339 aaPredicted RBP11.13□□□□□ -0.63
POLB-212ENST00000522297 CDC5LQ99459 802 aaKnown RBP11.13□□□□□ -0.63
POLB-212ENST00000522297 EYA3Q99504 573 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 BCL2L13Q9BXK5 485 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 BSDC1Q9NW68 430 aaPredicted RBP11.13□□□□□ -0.63
POLB-212ENST00000522297 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
POLB-212ENST00000522297 COL4A1P02462 1669 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 PSMD14O00487 310 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 UFL1O94874 794 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 CSF1RP07333 972 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 ADARB2Q9NS39 739 aaKnown RBP11.12□□□□□ -0.63
POLB-212ENST00000522297 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
POLB-212ENST00000522297 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
POLB-212ENST00000522297 TAF1P21675 1872 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 E9PSI1 815 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 ECE2O60344 883 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 MS4A1P11836 297 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 HIRAP54198 1017 aaPredicted RBP11.11□□□□□ -0.63
POLB-212ENST00000522297 FMR1Q06787 632 aaKnown RBP eCLIP11.11□□□□□ -0.63
POLB-212ENST00000522297 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 MKRN1Q9UHC7 482 aaKnown RBP11.11□□□□□ -0.63
POLB-212ENST00000522297 DDX60Q8IY21 1712 aaKnown RBP11.11□□□□□ -0.63
POLB-212ENST00000522297 LAMB2P55268 1798 aa11.11□□□□□ -0.63
POLB-212ENST00000522297 XDHP47989 1333 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 TMEM88BA6NKF7 163 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 H7C1D1 291 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 ITGA6P23229 1130 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 FOXO4P98177 505 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 DPF2Q92785 391 aa11.1□□□□□ -0.63
POLB-212ENST00000522297 DUOX1Q9NRD9 1551 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
POLB-212ENST00000522297 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
POLB-212ENST00000522297 GCGRP47871 477 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 PTPN5P54829 565 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 TRPM4Q8TD43 1214 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 SCN4AP35499 1836 aa11.09□□□□□ -0.63
POLB-212ENST00000522297 GRM8O00222 908 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 TRAF5O00463 557 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
POLB-212ENST00000522297 CCT4P50991 539 aaKnown RBP11.08□□□□□ -0.64
POLB-212ENST00000522297 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 LMBR1LQ6UX01 489 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
POLB-212ENST00000522297 SSH1Q8WYL5 1049 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 MPHOSPH8Q99549 860 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
POLB-212ENST00000522297 C9orf78Q9NZ63 289 aaPredicted RBP11.08□□□□□ -0.64
POLB-212ENST00000522297 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 ALDH1L1O75891 902 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 CFHP08603 1231 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
POLB-212ENST00000522297 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
POLB-212ENST00000522297 CST9Q5W186 159 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
POLB-212ENST00000522297 LEMD3Q9Y2U8 911 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
POLB-212ENST00000522297 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 SNAP23O00161 211 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 EGFRP00533 1210 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 VEGFBP49765 207 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 DEFB115Q30KQ5 88 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
POLB-212ENST00000522297 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 HELBQ8NG08 1087 aaPredicted RBP11.06□□□□□ -0.64
POLB-212ENST00000522297 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
POLB-212ENST00000522297 ANKRD2Q9GZV1 360 aa11.06□□□□□ -0.64
POLB-212ENST00000522297 CNTNAP1P78357 1384 aa11.05□□□□□ -0.64
POLB-212ENST00000522297 LRRC37AA6NMS7 1700 aa11.05□□□□□ -0.64
POLB-212ENST00000522297 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
POLB-212ENST00000522297 TAF5LO75529 589 aa11.05□□□□□ -0.64
POLB-212ENST00000522297 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms