RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 TCERG1LQ5VWI1 586 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 USP6P35125 1406 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 ARHGAP31Q2M1Z3 1444 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 FAM196AQ6ZSG2 479 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 ARAP3Q8WWN8 1544 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 ZNF165P49910 485 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 USP37Q86T82 979 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 KDM5CP41229 1560 aa18.41■□□□□ 0.54
USP42-207ENST00000521713 GBP2P32456 591 aaPredicted RBP18.41■□□□□ 0.54
USP42-207ENST00000521713 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 YEATS4O95619 227 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 SIK1P57059 783 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 NAA15Q9BXJ9 866 aaKnown RBP18.4■□□□□ 0.54
USP42-207ENST00000521713 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 USO1O60763 962 aaKnown RBP18.4■□□□□ 0.54
USP42-207ENST00000521713 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 PLS1Q14651 629 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 SMC1AQ14683 1233 aaKnown RBP18.4■□□□□ 0.54
USP42-207ENST00000521713 GPATCH11Q8N954 259 aa18.4■□□□□ 0.54
USP42-207ENST00000521713 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
USP42-207ENST00000521713 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
USP42-207ENST00000521713 STAT6P42226 847 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 NIM1KQ8IY84 436 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 ARFGAP3Q9NP61 516 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 BIN1O00499 593 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 CCDC174Q6PII3 467 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 TMEM87AQ8NBN3 555 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 MNAT1P51948 309 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 TRMT1Q9NXH9 659 aaKnown RBP18.39■□□□□ 0.53
USP42-207ENST00000521713 GRM1Q13255 1194 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 ARHGEF10LQ9HCE6 1279 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
USP42-207ENST00000521713 TAF5LO75529 589 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
USP42-207ENST00000521713 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 OGFRQ9NZT2 677 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 CTSWP56202 376 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 RNF187Q5TA31 235 aaPredicted RBP18.38■□□□□ 0.53
USP42-207ENST00000521713 KRT79Q5XKE5 535 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 KRT2P35908 639 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
USP42-207ENST00000521713 EHBP1Q8NDI1 1231 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
USP42-207ENST00000521713 ABCC3O15438 1527 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
USP42-207ENST00000521713 MYZAPP0CAP1 466 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 AK2P54819 239 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 CCDC91Q7Z6B0 441 aa18.38■□□□□ 0.53
USP42-207ENST00000521713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
USP42-207ENST00000521713 TDRD12Q587J7 1177 aaKnown RBP18.37■□□□□ 0.53
USP42-207ENST00000521713 BICD1Q96G01 975 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 ZNF335Q9H4Z2 1342 aaPredicted RBP18.37■□□□□ 0.53
USP42-207ENST00000521713 PCCAP05165 728 aaPredicted RBP18.37■□□□□ 0.53
USP42-207ENST00000521713 ZBTB38Q8NAP3 1195 aaPredicted RBP18.37■□□□□ 0.53
USP42-207ENST00000521713 FAM200AQ8TCP9 573 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 CCDC175P0C221 793 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 RXRBP28702 533 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 KDRP35968 1356 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 GPAA1O43292 621 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 IRX3P78415 501 aaPredicted RBP18.37■□□□□ 0.53
USP42-207ENST00000521713 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
USP42-207ENST00000521713 BRAPQ7Z569 592 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
USP42-207ENST00000521713 ARMT1Q9H993 441 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 KCNQ3O43525 872 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 SLU7O95391 586 aaKnown RBP18.36■□□□□ 0.53
USP42-207ENST00000521713 TRIM47Q96LD4 638 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 SPECC1LQ69YQ0 1117 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
USP42-207ENST00000521713 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
USP42-207ENST00000521713 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
USP42-207ENST00000521713 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 F13A1P00488 732 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 TUBBP07437 444 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
USP42-207ENST00000521713 RAB3GAP1Q15042 981 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 GLT8D2Q9H1C3 349 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
USP42-207ENST00000521713 ERBB3P21860 1342 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 SPAG1Q07617 926 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 CCDC24Q8N4L8 307 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 TMOD4Q9NZQ9 345 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
USP42-207ENST00000521713 SPTLC2O15270 562 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms