RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NCLP19338 710 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 GPT2Q8TD30 523 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 ZNF274Q96GC6 653 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 ARMT1Q9H993 441 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 GNAT2P19087 354 aa21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 GRAPQ13588 217 aa21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 GRAPLQ8TC17 118 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 LLPHQ9BRT6 129 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 NBPF3Q9H094 633 aa21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 ABCF2Q9UG63 623 aa21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
TRAPPC9-210ENST00000521667 PRC1O43663 620 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 JAK2O60674 1132 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 MBD3O95983 291 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 KLRK1P26718 216 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 EVCP57679 992 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 TRDNQ13061 729 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 TBC1D10CQ8IV04 446 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 IFNL3Q8IZI9 196 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 EPB41L4AQ9HCS5 686 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 TFCP2L1Q9NZI6 479 aa21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
TRAPPC9-210ENST00000521667 LCORLQ8N3X6 602 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 TMEM87AQ8NBN3 555 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 SMARCC2Q8TAQ2 1214 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 NAPBQ9H115 298 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 RAI14Q9P0K7 980 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 SERPINB2P05120 415 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 CYP7A1P22680 504 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 PDIA3P30101 505 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 HIBADHP31937 336 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 ANTXR2P58335 489 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 ST5P78524 1137 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 CAVIN1Q6NZI2 390 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 CHMP4CQ96CF2 233 aa21.79■■□□□ 1.08
TRAPPC9-210ENST00000521667 PDS5AQ29RF7 1337 aaKnown RBP21.78■■□□□ 1.08
TRAPPC9-210ENST00000521667 GSG1L2A8MUP6 293 aa21.78■■□□□ 1.08
TRAPPC9-210ENST00000521667 USP48Q86UV5 1035 aa21.78■■□□□ 1.08
TRAPPC9-210ENST00000521667 CDC37L1Q7L3B6 337 aa21.77■■□□□ 1.08
TRAPPC9-210ENST00000521667 NACAP1Q9BZK3 213 aa21.77■■□□□ 1.08
TRAPPC9-210ENST00000521667 GDPD2Q9HCC8 539 aa21.77■■□□□ 1.08
TRAPPC9-210ENST00000521667 CNPY2Q9Y2B0 182 aa21.77■■□□□ 1.08
TRAPPC9-210ENST00000521667 SLC4A4Q9Y6R1 1079 aa21.77■■□□□ 1.08
TRAPPC9-210ENST00000521667 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.07
TRAPPC9-210ENST00000521667 NSUN7Q8NE18 718 aaKnown RBP21.77■■□□□ 1.07
TRAPPC9-210ENST00000521667 GPHNQ9NQX3 736 aaPredicted RBP21.77■■□□□ 1.07
TRAPPC9-210ENST00000521667 NAP1L2Q9ULW6 460 aaPredicted RBP21.77■■□□□ 1.07
TRAPPC9-210ENST00000521667 PRKAB2O43741 272 aa21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 CCT2P78371 535 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 EN1Q05925 392 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 EZH2Q15910 746 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 ADGRA1Q86SQ6 560 aa21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-210ENST00000521667 HMGN5P82970 282 aaKnown RBP21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 FAM184AQ8NB25 1140 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 IRS2Q9Y4H2 1338 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 ZBTB22O15209 634 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 CTDNEP1O95476 244 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 DDX11Q96FC9 970 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 NSFL1CQ9UNZ2 370 aaKnown RBP21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
TRAPPC9-210ENST00000521667 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 TDO2P48775 406 aa21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 COL23A1Q86Y22 540 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 NCOA5Q9HCD5 579 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 ANKIB1Q9P2G1 1089 aa21.74■■□□□ 1.07
TRAPPC9-210ENST00000521667 DNM1Q05193 864 aaKnown RBP21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 DDR1Q08345 913 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 ZSCAN23Q3MJ62 389 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 RGPD3A6NKT7 1758 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 RGPD4Q7Z3J3 1758 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 KLF18A0A0U1RQI7 1052 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 POLRMTO00411 1230 aaKnown RBP21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 MRE11P49959 708 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 CSPP1Q1MSJ5 1256 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 NAA16Q6N069 864 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 CYB5R4Q7L1T6 521 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 TXNRD3Q86VQ6 643 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 BRPF3Q9ULD4 1205 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 KIF3AQ9Y496 699 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 NEDD4P46934 1319 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 XDHP47989 1333 aa21.73■■□□□ 1.07
TRAPPC9-210ENST00000521667 B4E1Z4 1266 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 GADD45BO75293 160 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 ZNF445P59923 1031 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 FERMT3Q86UX7 667 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 GAS2L3Q86XJ1 694 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 RIOK1Q9BRS2 568 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 RBM27Q9P2N5 1060 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 SALL1Q9NSC2 1324 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 FIBPO43427 364 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 CTDSPL2Q05D32 466 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 CAMKK2Q96RR4 588 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 CNNM2Q9H8M5 875 aa21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 ANGEL1Q9UNK9 670 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-210ENST00000521667 CACNA1SQ13698 1873 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms