RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 GGA1Q9UJY5 639 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 MAP3K2Q9Y2U5 619 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 MYH3P11055 1940 aa14.33□□□□□ -0.11
CSMD1-210ENST00000521646 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.12
CSMD1-210ENST00000521646 NBPF9Q3BBW0 867 aa14.33□□□□□ -0.12
CSMD1-210ENST00000521646 TTLL11Q8NHH1 800 aa14.33□□□□□ -0.12
CSMD1-210ENST00000521646 NBPF3Q9H094 633 aa14.33□□□□□ -0.12
CSMD1-210ENST00000521646 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
CSMD1-210ENST00000521646 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 SNAP23O00161 211 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 CTSWP56202 376 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
CSMD1-210ENST00000521646 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 C2orf69Q8N8R5 385 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 MINPP1Q9UNW1 487 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 AKAP11Q9UKA4 1901 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 A0A1B0GUL6 1792 aa14.32□□□□□ -0.12
CSMD1-210ENST00000521646 CASP7P55210 303 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 SOX10P56693 466 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 AGBL3Q8NEM8 1001 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 R3HDMLQ9H3Y0 253 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 HCSTQ9UBK5 93 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 RABGEF1Q9UJ41 708 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 FZD1Q9UP38 647 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 PCDHAC2Q9Y5I4 1007 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 XDHP47989 1333 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 AOX1Q06278 1338 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 IRS2Q9Y4H2 1338 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
CSMD1-210ENST00000521646 UBE2Q2LH0YL09 131 aa14.3□□□□□ -0.12
CSMD1-210ENST00000521646 GNAI1P63096 354 aa14.3□□□□□ -0.12
CSMD1-210ENST00000521646 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
CSMD1-210ENST00000521646 SAGE1Q9NXZ1 904 aa14.3□□□□□ -0.12
CSMD1-210ENST00000521646 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
CSMD1-210ENST00000521646 USP17L3A6NCW0 530 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 USP17L4A6NCW7 530 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 KSR2Q6VAB6 950 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 USP17L1Q7RTZ2 530 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 MED23Q9ULK4 1368 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 SSC5DA1L4H1 1573 aa14.29□□□□□ -0.12
CSMD1-210ENST00000521646 H7C1W4 665 aa14.28□□□□□ -0.12
CSMD1-210ENST00000521646 WNT10BO00744 389 aa14.28□□□□□ -0.12
CSMD1-210ENST00000521646 SASH1O94885 1247 aa14.28□□□□□ -0.12
CSMD1-210ENST00000521646 OSBPP22059 807 aa14.28□□□□□ -0.12
CSMD1-210ENST00000521646 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
CSMD1-210ENST00000521646 PITPNM2Q9BZ72 1349 aa14.27□□□□□ -0.12
CSMD1-210ENST00000521646 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
CSMD1-210ENST00000521646 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
CSMD1-210ENST00000521646 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
CSMD1-210ENST00000521646 CERS5Q8N5B7 392 aa14.27□□□□□ -0.13
CSMD1-210ENST00000521646 ZBED3Q96IU2 234 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-210ENST00000521646 TBC1D8O95759 1140 aa14.26□□□□□ -0.13
CSMD1-210ENST00000521646 CCDC30Q5VVM6 783 aa14.26□□□□□ -0.13
CSMD1-210ENST00000521646 PODNQ7Z5L7 613 aa14.26□□□□□ -0.13
CSMD1-210ENST00000521646 PTPN5P54829 565 aa14.25□□□□□ -0.13
CSMD1-210ENST00000521646 WNT2BQ93097 391 aa14.25□□□□□ -0.13
CSMD1-210ENST00000521646 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
CSMD1-210ENST00000521646 CAP1Q01518 475 aa14.24□□□□□ -0.13
CSMD1-210ENST00000521646 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
CSMD1-210ENST00000521646 GCKRQ14397 625 aa14.24□□□□□ -0.13
CSMD1-210ENST00000521646 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
CSMD1-210ENST00000521646 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
CSMD1-210ENST00000521646 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
CSMD1-210ENST00000521646 CSF1RP07333 972 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 ITGA6P23229 1130 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 PRKG1Q13976 671 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 CTU1Q7Z7A3 348 aaKnown RBP14.23□□□□□ -0.13
CSMD1-210ENST00000521646 KIAA0825Q8IV33 1275 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
CSMD1-210ENST00000521646 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
CSMD1-210ENST00000521646 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 TAF5LO75529 589 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
CSMD1-210ENST00000521646 MLLT3P42568 568 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-210ENST00000521646 FKBP1BP68106 108 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 FOXO4P98177 505 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-210ENST00000521646 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 HELBQ8NG08 1087 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-210ENST00000521646 COA1Q9GZY4 146 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 LAMB1P07942 1786 aa14.22□□□□□ -0.13
CSMD1-210ENST00000521646 F6X3S4 739 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 TM4SF4P48230 202 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 GTF2IP78347 998 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 CHRNDQ07001 517 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 FLIIQ13045 1269 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 LDLRAD1Q5T700 205 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 JAG2Q9Y219 1238 aa14.21□□□□□ -0.13
CSMD1-210ENST00000521646 FANCIQ9NVI1 1328 aa14.2□□□□□ -0.14
CSMD1-210ENST00000521646 OTOFQ9HC10 1997 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms