RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 CCDC158Q5M9N0 1113 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 TEKT1Q969V4 418 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
CLK4-209ENST00000521621 CRKP46108 304 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
CLK4-209ENST00000521621 CST9Q5W186 159 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 FAM83AQ86UY5 434 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 TNFAIP1Q13829 316 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 CERS3Q8IU89 383 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 SPATA5Q8NB90 893 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
CLK4-209ENST00000521621 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
CLK4-209ENST00000521621 GSTO1P78417 241 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 NBPF9Q3BBW0 867 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
CLK4-209ENST00000521621 LDHBP07195 334 aaKnown RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 USP48Q86UV5 1035 aa11.61□□□□□ -0.55
CLK4-209ENST00000521621 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 CDCA5Q96FF9 252 aa11.61□□□□□ -0.55
CLK4-209ENST00000521621 GLIS2Q9BZE0 524 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 DBNLQ9UJU6 430 aaKnown RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 MYH2Q9UKX2 1941 aa11.61□□□□□ -0.55
CLK4-209ENST00000521621 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 APOBEC3HQ6NTF7 200 aaKnown RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 CLASRPQ8N2M8 674 aaKnown RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
CLK4-209ENST00000521621 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 ZNF70Q9UC06 446 aaPredicted RBP11.61□□□□□ -0.55
CLK4-209ENST00000521621 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 MCAMP43121 646 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 TNNI2P48788 182 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 SAPCD2Q86UD0 394 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
CLK4-209ENST00000521621 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
CLK4-209ENST00000521621 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 LDHCP07864 332 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 GRIK5Q16478 980 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 ATP5JP18859 108 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 ECE1P42892 770 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 CHAF1AQ13111 956 aaPredicted RBP11.59□□□□□ -0.55
CLK4-209ENST00000521621 GORABQ5T7V8 394 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 EXOC6BQ9Y2D4 811 aa11.59□□□□□ -0.55
CLK4-209ENST00000521621 MROH7-TTC4A0A0A0MT08 1334 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 TRAF5O00463 557 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 PPP4CP60510 307 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 TTF1Q15361 905 aaPredicted RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 C2orf69Q8N8R5 385 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 DAGLAQ9Y4D2 1042 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 PCDHB15Q9Y5E8 787 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 ADM5C9JUS6 153 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 ENTPD3O75355 529 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 MAP2K2P36507 400 aa11.58□□□□□ -0.56
CLK4-209ENST00000521621 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
CLK4-209ENST00000521621 NF2P35240 595 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 MAP3K10Q02779 954 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 DEFB115Q30KQ5 88 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 AACSQ86V21 672 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 TEPSINQ96N21 525 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 DDX60LQ5H9U9 1706 aaKnown RBP11.57□□□□□ -0.56
CLK4-209ENST00000521621 CDK5RAP2Q96SN8 1893 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 PRDX5P30044 214 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 OTOFQ9HC10 1997 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
CLK4-209ENST00000521621 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 IQSEC3Q9UPP2 1182 aaPredicted RBP11.56□□□□□ -0.56
CLK4-209ENST00000521621 MYH7P12883 1935 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 CYP2E1P05181 493 aaPredicted RBP11.56□□□□□ -0.56
CLK4-209ENST00000521621 MECOMQ03112 1051 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
CLK4-209ENST00000521621 PLCG2P16885 1265 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 ZNF384Q8TF68 577 aa11.56□□□□□ -0.56
CLK4-209ENST00000521621 TLR7Q9NYK1 1049 aaKnown RBP11.56□□□□□ -0.56
CLK4-209ENST00000521621 SALL3Q9BXA9 1300 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms