RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 CUL9Q8IWT3 2517 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-208ENST00000521605 PDE8AO60658 829 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 IGHDP01880 384 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 HSP90B1P14625 803 aaKnown RBP13.48□□□□□ -0.25
MRPS28-208ENST00000521605 IREB2P48200 963 aaKnown RBP13.48□□□□□ -0.25
MRPS28-208ENST00000521605 GTF2IP78347 998 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 ZBED3Q96IU2 234 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-208ENST00000521605 MYD88Q99836 296 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 ZFYVE28Q9HCC9 887 aa13.48□□□□□ -0.25
MRPS28-208ENST00000521605 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
MRPS28-208ENST00000521605 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 USP2O75604 605 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 KLRK1P26718 216 aa13.47□□□□□ -0.25
MRPS28-208ENST00000521605 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 MTFR1Q15390 333 aa13.47□□□□□ -0.25
MRPS28-208ENST00000521605 ANKRD13AQ8IZ07 590 aa13.47□□□□□ -0.25
MRPS28-208ENST00000521605 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-208ENST00000521605 CCL15-CCL14A0A0B4J2E2 113 aa13.46□□□□□ -0.25
MRPS28-208ENST00000521605 CCL15Q16663 113 aa13.46□□□□□ -0.25
MRPS28-208ENST00000521605 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
MRPS28-208ENST00000521605 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
MRPS28-208ENST00000521605 PRO3102Q9H379 93 aa13.46□□□□□ -0.25
MRPS28-208ENST00000521605 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
MRPS28-208ENST00000521605 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 LAMA3Q16787 3333 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
MRPS28-208ENST00000521605 MMP14P50281 582 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 FLIIQ13045 1269 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 KIF22Q14807 665 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
MRPS28-208ENST00000521605 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 HTATIP2Q9BUP3 242 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 PPP2R3BQ9Y5P8 575 aa13.45□□□□□ -0.26
MRPS28-208ENST00000521605 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 AOX1Q06278 1338 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 MYO1BO43795 1136 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 CWC25Q9NXE8 425 aaPredicted RBP13.44□□□□□ -0.26
MRPS28-208ENST00000521605 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
MRPS28-208ENST00000521605 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
MRPS28-208ENST00000521605 CTSWP56202 376 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 LACTBP83111 547 aaPredicted RBP13.43□□□□□ -0.26
MRPS28-208ENST00000521605 RASA3Q14644 834 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 CFAP100Q494V2 611 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 CERS5Q8N5B7 392 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 PRMT6Q96LA8 375 aaPredicted RBP13.43□□□□□ -0.26
MRPS28-208ENST00000521605 GREM2Q9H772 168 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 PHAXQ9H814 394 aaKnown RBP13.43□□□□□ -0.26
MRPS28-208ENST00000521605 BSDC1Q9NW68 430 aaPredicted RBP13.43□□□□□ -0.26
MRPS28-208ENST00000521605 ECM29Q5VYK3 1845 aa13.43□□□□□ -0.26
MRPS28-208ENST00000521605 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
MRPS28-208ENST00000521605 GTF2A2P52657 109 aa13.42□□□□□ -0.26
MRPS28-208ENST00000521605 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
MRPS28-208ENST00000521605 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
MRPS28-208ENST00000521605 UNC80Q8N2C7 3258 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 GNAI3P08754 354 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 PDE4AP27815 886 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 KCNJ4P48050 445 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 VGLL4Q14135 290 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
MRPS28-208ENST00000521605 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
MRPS28-208ENST00000521605 EVI5O60447 810 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 TLR2O60603 784 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 CCL5P13501 91 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 GJA8P48165 433 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 NUCB1Q02818 461 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-208ENST00000521605 Q7L0L9 218 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 COL25A1Q9BXS0 654 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-208ENST00000521605 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
MRPS28-208ENST00000521605 A0A1W2PPC1 479 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 FARP2O94887 1054 aaPredicted RBP13.39□□□□□ -0.27
MRPS28-208ENST00000521605 GRK4P32298 578 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 IGHMBP2P38935 993 aaKnown RBP13.39□□□□□ -0.27
MRPS28-208ENST00000521605 G2E3Q7L622 706 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms