RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 PUF60Q9UHX1 559 aaKnown RBP13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 RAD50Q92878 1312 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ZSCAN26Q16670 478 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 HEATR3Q7Z4Q2 680 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CALM1P0DP23 149 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CALM2P0DP24 149 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CALM3P0DP25 149 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 INPP5BP32019 993 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 WHAMMP3Q1A5X7 153 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 BIRC2Q13490 618 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 WDR78Q5VTH9 848 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CCDC114Q96M63 670 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 STMN4Q9H169 189 aaPredicted RBP13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 CREB3L3Q68CJ9 461 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 TCEANC2Q96MN5 208 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 ERCC3P19447 782 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 CWF19L2Q2TBE0 894 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 IP6K1Q92551 441 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 EDC4Q6P2E9 1401 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 AFMP43652 599 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 UBASH3AP57075 661 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 SATB1Q01826 763 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 DDB1Q16531 1140 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 ZBTB17Q13105 803 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 BICC1Q9H694 974 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 VPS18Q9P253 973 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 RASAL2Q9UJF2 1139 aa13.65□□□□□ -0.22
ERGIC1-208ENST00000520399 RTL1A6NKG5 1358 aa13.65□□□□□ -0.23
ERGIC1-208ENST00000520399 TTC36A6NLP5 189 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 AK2P54819 239 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 N4BP3O15049 544 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC63Q8NA47 563 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 TUBBP07437 444 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 TTC14Q96N46 770 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 DNM1Q05193 864 aaKnown RBP13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 TRAF1Q13077 416 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC77Q9BR77 488 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 FAM114A2Q9NRY5 505 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 SEPT10Q9P0V9 454 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 HDAC9Q9UKV0 1011 aa13.64□□□□□ -0.23
ERGIC1-208ENST00000520399 A6NNZ2 444 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 KRT2P35908 639 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 TUBB8Q3ZCM7 444 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 MAGEB6Q8N7X4 407 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC110Q8TBZ0 833 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 LUC7L2Q9Y383 392 aaKnown RBP13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 CHMLP26374 656 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 ARHGAP25P42331 645 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 NOP2P46087 812 aaKnown RBP13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 NAPAP54920 295 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 PICALMQ13492 652 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 SMC5Q8IY18 1101 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 BABAM1Q9NWV8 329 aa13.63□□□□□ -0.23
ERGIC1-208ENST00000520399 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 GCP02774 474 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC174Q6PII3 467 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms