RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
VEGFA-221ENST00000520265 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
VEGFA-221ENST00000520265 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
VEGFA-221ENST00000520265 MTMR14Q8NCE2 650 aa17.47■□□□□ 0.39
VEGFA-221ENST00000520265 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
VEGFA-221ENST00000520265 DEFB129Q9H1M3 183 aa17.47■□□□□ 0.39
VEGFA-221ENST00000520265 TMOD2Q9NZR1 351 aa17.47■□□□□ 0.39
VEGFA-221ENST00000520265 COL1A1P02452 1464 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-221ENST00000520265 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 APBB1O00213 710 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
VEGFA-221ENST00000520265 POLA2Q14181 598 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 RGMBQ6NW40 437 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 ZBED3Q96IU2 234 aaPredicted RBP17.46■□□□□ 0.39
VEGFA-221ENST00000520265 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
VEGFA-221ENST00000520265 ABCF2Q9UG63 623 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 ECM29Q5VYK3 1845 aa17.46■□□□□ 0.39
VEGFA-221ENST00000520265 AOX1Q06278 1338 aa17.46■□□□□ 0.38
VEGFA-221ENST00000520265 UBE2Q2LH0YL09 131 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 SEMA3EO15041 775 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 MAP2K1Q02750 393 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-221ENST00000520265 TNFAIP1Q13829 316 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 ARMC9Q7Z3E5 817 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
VEGFA-221ENST00000520265 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-221ENST00000520265 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-221ENST00000520265 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
VEGFA-221ENST00000520265 PRDX5P30044 214 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 TNNI2P48788 182 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 ZGPATQ8N5A5 531 aaKnown RBP17.44■□□□□ 0.38
VEGFA-221ENST00000520265 HHIPL1Q96JK4 782 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 ANGEL1Q9UNK9 670 aaKnown RBP17.44■□□□□ 0.38
VEGFA-221ENST00000520265 SUGT1Q9Y2Z0 365 aa17.44■□□□□ 0.38
VEGFA-221ENST00000520265 HMMRO75330 724 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 CACNB3P54284 484 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 FKBP1BP68106 108 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 NOGQ13253 232 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 RASA3Q14644 834 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 FZD1Q9UP38 647 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 PPP2R3BQ9Y5P8 575 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
VEGFA-221ENST00000520265 PCNTO95613 3336 aa17.42■□□□□ 0.38
VEGFA-221ENST00000520265 FOXN1O15353 648 aa17.42■□□□□ 0.38
VEGFA-221ENST00000520265 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
VEGFA-221ENST00000520265 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
VEGFA-221ENST00000520265 CCDC158Q5M9N0 1113 aa17.42■□□□□ 0.38
VEGFA-221ENST00000520265 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
VEGFA-221ENST00000520265 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
VEGFA-221ENST00000520265 PDE3AQ14432 1141 aa17.41■□□□□ 0.38
VEGFA-221ENST00000520265 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
VEGFA-221ENST00000520265 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
VEGFA-221ENST00000520265 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
VEGFA-221ENST00000520265 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
VEGFA-221ENST00000520265 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 MAP2K2P36507 400 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-221ENST00000520265 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-221ENST00000520265 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-221ENST00000520265 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-221ENST00000520265 TSKSQ9UJT2 592 aa17.4■□□□□ 0.38
VEGFA-221ENST00000520265 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 ERICH6Q7L0X2 663 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 RASAL3Q86YV0 1011 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 SNRKQ9NRH2 765 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 WBP1LQ9NX94 342 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 RAI14Q9P0K7 980 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 HMG20BQ9P0W2 317 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
VEGFA-221ENST00000520265 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
VEGFA-221ENST00000520265 SLC10A3P09131 477 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
VEGFA-221ENST00000520265 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-221ENST00000520265 TCP10Q12799 353 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 TBC1D9Q6ZT07 1266 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 AACSQ86V21 672 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-221ENST00000520265 ZIC5Q96T25 663 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 THSD7BQ9C0I4 1608 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 SALL1Q9NSC2 1324 aa17.38■□□□□ 0.37
VEGFA-221ENST00000520265 ARID4AP29374 1257 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-221ENST00000520265 LBX1P52954 281 aa17.37■□□□□ 0.37
VEGFA-221ENST00000520265 APOBEC3HQ6NTF7 200 aaKnown RBP17.37■□□□□ 0.37
VEGFA-221ENST00000520265 GPR108Q9NPR9 543 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms