RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 NLGN1Q8N2Q7 840 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 NACAP1Q9BZK3 213 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 NAPBQ9H115 298 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 IFNL3Q8IZI9 196 aa31.85■■■□□ 2.69
COL13A1-212ENST00000520133 CHMP4CQ96CF2 233 aa31.85■■■□□ 2.69
COL13A1-212ENST00000520133 WDR19Q8NEZ3 1342 aa31.85■■■□□ 2.69
COL13A1-212ENST00000520133 MB21D2Q8IYB1 491 aaPredicted RBP31.84■■■□□ 2.69
COL13A1-212ENST00000520133 CHD4Q14839 1912 aa31.84■■■□□ 2.69
COL13A1-212ENST00000520133 PFKFB2O60825 505 aa31.84■■■□□ 2.69
COL13A1-212ENST00000520133 ATP6V1DQ9Y5K8 247 aa31.84■■■□□ 2.69
COL13A1-212ENST00000520133 CACNA1SQ13698 1873 aa31.83■■■□□ 2.69
COL13A1-212ENST00000520133 RGPD3A6NKT7 1758 aaPredicted RBP31.83■■■□□ 2.69
COL13A1-212ENST00000520133 RGPD4Q7Z3J3 1758 aa31.83■■■□□ 2.69
COL13A1-212ENST00000520133 LCORLQ8N3X6 602 aa31.83■■■□□ 2.69
COL13A1-212ENST00000520133 LMBRD1Q9NUN5 540 aa31.83■■■□□ 2.69
COL13A1-212ENST00000520133 TNS1Q9HBL0 1735 aaKnown RBP31.82■■■□□ 2.69
COL13A1-212ENST00000520133 APOBRQ0VD83 1088 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 COL23A1Q86Y22 540 aaPredicted RBP31.82■■■□□ 2.68
COL13A1-212ENST00000520133 ZNF274Q96GC6 653 aaPredicted RBP31.82■■■□□ 2.68
COL13A1-212ENST00000520133 SLC4A4Q9Y6R1 1079 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 IRS2Q9Y4H2 1338 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 BBOX1O75936 387 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 LARP1BQ659C4 914 aaKnown RBP31.82■■■□□ 2.68
COL13A1-212ENST00000520133 CHST3Q7LGC8 479 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 DDX49Q9Y6V7 483 aaKnown RBP31.82■■■□□ 2.68
COL13A1-212ENST00000520133 CCDC88AQ3V6T2 1871 aa31.82■■■□□ 2.68
COL13A1-212ENST00000520133 GSG1L2A8MUP6 293 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 PRC1O43663 620 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 F13A1P00488 732 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 HOXA10P31260 410 aaPredicted RBP31.81■■■□□ 2.68
COL13A1-212ENST00000520133 KLHL40Q2TBA0 621 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 TMED8Q6PL24 325 aaPredicted RBP31.81■■■□□ 2.68
COL13A1-212ENST00000520133 MIGA1Q8NAN2 632 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 LLPHQ9BRT6 129 aaKnown RBP31.81■■■□□ 2.68
COL13A1-212ENST00000520133 GZF1Q9H116 711 aaPredicted RBP31.81■■■□□ 2.68
COL13A1-212ENST00000520133 EPB41L4AQ9HCS5 686 aaPredicted RBP31.81■■■□□ 2.68
COL13A1-212ENST00000520133 TCHHQ07283 1943 aa31.81■■■□□ 2.68
COL13A1-212ENST00000520133 MAGEB6P1A0A0J9YX57 407 aa31.8■■■□□ 2.68
COL13A1-212ENST00000520133 KLRG2A4D1S0 409 aaPredicted RBP31.8■■■□□ 2.68
COL13A1-212ENST00000520133 NAA16Q6N069 864 aaPredicted RBP31.8■■■□□ 2.68
COL13A1-212ENST00000520133 CRAMP1Q96RY5 1269 aa31.8■■■□□ 2.68
COL13A1-212ENST00000520133 NBPF3Q9H094 633 aa31.8■■■□□ 2.68
COL13A1-212ENST00000520133 PRPF40AO75400 957 aaKnown RBP31.79■■■□□ 2.68
COL13A1-212ENST00000520133 EVCP57679 992 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 SCRN1Q12765 414 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 MTMR6Q9Y217 621 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 TDO2P48775 406 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 TXNRD3Q86VQ6 643 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 TBC1D10CQ8IV04 446 aa31.79■■■□□ 2.68
COL13A1-212ENST00000520133 C15orf52Q6ZUT6 534 aaKnown RBP31.78■■■□□ 2.68
COL13A1-212ENST00000520133 ADGRA1Q86SQ6 560 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 NRXN2Q9P2S2 1712 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 IGSF3O75054 1194 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 ATP2B4P23634 1241 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 TMC4Q7Z404 712 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 ZNF804AQ7Z570 1209 aa31.77■■■□□ 2.68
COL13A1-212ENST00000520133 MAST2Q6P0Q8 1798 aa31.76■■■□□ 2.67
COL13A1-212ENST00000520133 VPS37CA5D8V6 355 aaPredicted RBP31.76■■■□□ 2.67
COL13A1-212ENST00000520133 PRKAB2O43741 272 aa31.76■■■□□ 2.67
COL13A1-212ENST00000520133 PDIA3P30101 505 aaKnown RBP31.76■■■□□ 2.67
COL13A1-212ENST00000520133 CHAF1AQ13111 956 aaPredicted RBP31.76■■■□□ 2.67
COL13A1-212ENST00000520133 SPTY2D1Q68D10 685 aaPredicted RBP31.76■■■□□ 2.67
COL13A1-212ENST00000520133 NAP1L2Q9ULW6 460 aaPredicted RBP31.76■■■□□ 2.67
COL13A1-212ENST00000520133 ANTXR2P58335 489 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 GPSM2P81274 684 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 NSUN4Q96CB9 384 aaKnown RBP31.75■■■□□ 2.67
COL13A1-212ENST00000520133 BRIP1Q9BX63 1249 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 CNNM2Q9H8M5 875 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 NSFL1CQ9UNZ2 370 aaKnown RBP31.75■■■□□ 2.67
COL13A1-212ENST00000520133 ANKRD31Q8N7Z5 1873 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 TIAM2Q8IVF5 1701 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 CHAMP1Q96JM3 812 aa31.75■■■□□ 2.67
COL13A1-212ENST00000520133 DTNBO60941 627 aa31.74■■■□□ 2.67
COL13A1-212ENST00000520133 SMARCC2Q8TAQ2 1214 aa31.74■■■□□ 2.67
COL13A1-212ENST00000520133 RIOK1Q9BRS2 568 aaKnown RBP31.74■■■□□ 2.67
COL13A1-212ENST00000520133 KIF3AQ9Y496 699 aa31.74■■■□□ 2.67
COL13A1-212ENST00000520133 HMGN5P82970 282 aaKnown RBP31.73■■■□□ 2.67
COL13A1-212ENST00000520133 WDR66Q8TBY9 1149 aa31.73■■■□□ 2.67
COL13A1-212ENST00000520133 GGA1Q9UJY5 639 aa31.73■■■□□ 2.67
COL13A1-212ENST00000520133 MECOMQ03112 1051 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 FAM184AQ8NB25 1140 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 TDRD7Q8NHU6 1098 aaKnown RBP31.72■■■□□ 2.67
COL13A1-212ENST00000520133 RGS17Q9UGC6 210 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-212ENST00000520133 SALL1Q9NSC2 1324 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 JAK2O60674 1132 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 UFL1O94874 794 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 FOXD4L6Q3SYB3 417 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-212ENST00000520133 AKNAD1Q5T1N1 836 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 FOXD4L3Q6VB84 417 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-212ENST00000520133 KRT23Q9C075 422 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 PODXL2Q9NZ53 605 aa31.72■■■□□ 2.67
COL13A1-212ENST00000520133 CCT2P78371 535 aaKnown RBP31.71■■■□□ 2.67
COL13A1-212ENST00000520133 MFSD6Q6ZSS7 791 aa31.71■■■□□ 2.67
COL13A1-212ENST00000520133 NSUN7Q8NE18 718 aaKnown RBP31.71■■■□□ 2.67
COL13A1-212ENST00000520133 TMEM87BQ96K49 555 aa31.71■■■□□ 2.67
COL13A1-212ENST00000520133 PARP3Q9Y6F1 533 aa31.71■■■□□ 2.67
COL13A1-212ENST00000520133 B4E1Z4 1266 aa31.7■■■□□ 2.67
COL13A1-212ENST00000520133 ZNF384Q8TF68 577 aa31.7■■■□□ 2.67
COL13A1-212ENST00000520133 RNF41Q9H4P4 317 aaPredicted RBP31.7■■■□□ 2.67
COL13A1-212ENST00000520133 ANGEL1Q9UNK9 670 aaKnown RBP31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms