RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ANKRD24Q8TF21 1146 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 ZKSCAN3Q9BRR0 538 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 OSBPL2Q9H1P3 480 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 ZFATQ9P243 1243 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 ADAMTS1Q9UHI8 967 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 RALGAPBQ86X10 1494 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 RTEL1-TNFRSF6BF6WH68 1400 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 SENP3-EIF4A1A0A087X0R7 540 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 KIF4AO95239 1232 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 ACPPP15309 386 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 PLAURQ03405 335 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 DDX10Q13206 875 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 CTC1Q2NKJ3 1217 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 CCNJLQ8IV13 435 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 CKAP2LQ8IYA6 745 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 SEC16BQ96JE7 1060 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 CNTNAP3BQ96NU0 1288 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 TCF12Q99081 682 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 OSMRQ99650 979 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 CNTNAP3Q9BZ76 1288 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 NUCKS1Q9H1E3 243 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 TLR7Q9NYK1 1049 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 FANCAO15360 1455 aa6.57□□□□□ -1.36
CTNNA1-212ENST00000518919 ATP7AQ04656 1500 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 WASHC2AQ641Q2 1341 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 ADGRL1O94910 1474 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 THBS1P07996 1170 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 CELA3AP09093 270 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 MAPTP10636 758 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 NASPP49321 788 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 TNP2Q05952 138 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 BMS1Q14692 1282 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 COL13A1Q5TAT6 717 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 BHMTQ93088 406 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 NSUN5Q96P11 429 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 CEP44Q9C0F1 390 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 PIF1Q9H611 641 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 ZFYVE1Q9HBF4 777 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 MARK1Q9P0L2 795 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 DEPDC5O75140 1603 aa6.56□□□□□ -1.36
CTNNA1-212ENST00000518919 ATP10AO60312 1499 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 MROH1Q8NDA8 1641 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 H7C1W4 665 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 MAP3K6O95382 1288 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 HOXD8P13378 290 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 NCLP19338 710 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 LIG3P49916 1009 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 FAM160A1Q05DH4 1040 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 NFX1Q12986 1120 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 GRIN2CQ14957 1233 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 SNAP47Q5SQN1 464 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 RAB44Q7Z6P3 723 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 PHC3Q8NDX5 983 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 ZNF296Q8WUU4 475 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 RHOVQ96L33 236 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 EFCC1Q9HA90 598 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 SUPT16HQ9Y5B9 1047 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 CNTLNQ9NXG0 1405 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 KDM5CP41229 1560 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 VWDEQ8N2E2 1590 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 CCDC7Q96M83 1385 aa6.55□□□□□ -1.36
CTNNA1-212ENST00000518919 A2MP01023 1474 aa6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 SPAG9O60271 1321 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 SCAPERQ9BY12 1400 aa6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 AXIN1O15169 862 aa6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 DHX32Q7L7V1 743 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 DZANK1Q9NVP4 752 aa6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 STRIP2Q9ULQ0 834 aa6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 PRDM15P57071 1507 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-212ENST00000518919 CCDC144AA2RUR9 1427 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 POGZQ7Z3K3 1410 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 ANKRD62A6NC57 917 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 METTL12A8MUP2 240 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 C11orf95C9JLR9 678 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 PPM1GO15355 546 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 TRPA1O75762 1119 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 CD33P20138 364 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 ITPKAP23677 461 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 GRIA4P48058 902 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 NRLP54845 237 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 PTSQ03393 145 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 UBAP2LQ14157 1087 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 PKDCCQ504Y2 493 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 NBPF6Q5VWK0 638 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 ABHD17AQ96GS6 310 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 NBPF4Q96M43 638 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 HHIPQ96QV1 700 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 SLC30A3Q99726 388 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms