RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TJP1Q07157 1748 aa8.31□□□□□ -1.08
PABPC1-207ENST00000518716 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 FOXN1O15353 648 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 CABP4P57796 275 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 AMOTQ4VCS5 1084 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-207ENST00000518716 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 USPL1Q5W0Q7 1092 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 TTLL6Q8N841 843 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 NARFQ9UHQ1 456 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 AFDNP55196 1824 aaKnown RBP8.3□□□□□ -1.08
PABPC1-207ENST00000518716 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
PABPC1-207ENST00000518716 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 H7C1W4 665 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 ZMYND10O75800 440 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-207ENST00000518716 MTHFSP49914 203 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 DNAJC10Q8IXB1 793 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 SUV39H2Q9H5I1 410 aa8.29□□□□□ -1.08
PABPC1-207ENST00000518716 CNTNAP1P78357 1384 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 CARMIL3Q8ND23 1372 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 C1QTNF9BB2RNN3 333 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 SERPINB2P05120 415 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-207ENST00000518716 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-207ENST00000518716 AEBP1Q8IUX7 1158 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 ADAM32Q8TC27 787 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 DICER1Q9UPY3 1922 aaKnown RBP8.28□□□□□ -1.08
PABPC1-207ENST00000518716 FER1L6Q2WGJ9 1857 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 LTBP3Q9NS15 1303 aa8.28□□□□□ -1.08
PABPC1-207ENST00000518716 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
PABPC1-207ENST00000518716 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
PABPC1-207ENST00000518716 LINC00114Q6XXX2 140 aa8.27□□□□□ -1.09
PABPC1-207ENST00000518716 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
PABPC1-207ENST00000518716 C2CD5Q86YS7 1000 aa8.27□□□□□ -1.09
PABPC1-207ENST00000518716 GAS2L1Q99501 681 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-207ENST00000518716 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
PABPC1-207ENST00000518716 NSFL1CQ9UNZ2 370 aaKnown RBP8.27□□□□□ -1.09
PABPC1-207ENST00000518716 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 H0YIN7 160 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 KRTAP9-9Q9BYP9 154 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 KRTAP9-4Q9BYQ2 154 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 MRC1P22897 1456 aa8.26□□□□□ -1.09
PABPC1-207ENST00000518716 SCN11AQ9UI33 1791 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 COL15A1P39059 1388 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 DDNO94850 711 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-207ENST00000518716 THBS1P07996 1170 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 CHRNA4P43681 627 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 MAP2K3P46734 347 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-207ENST00000518716 RGS19P49795 217 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 EIF5P55010 431 aaKnown RBP8.25□□□□□ -1.09
PABPC1-207ENST00000518716 POU4F2Q12837 409 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
PABPC1-207ENST00000518716 C7orf43Q8WVR3 580 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 BRIP1Q9BX63 1249 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 LGR6Q9HBX8 967 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
PABPC1-207ENST00000518716 VIRMAQ69YN4 1812 aaKnown RBP8.24□□□□□ -1.09
PABPC1-207ENST00000518716 C21orf2O43822 256 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 IL13P35225 146 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-207ENST00000518716 PTK2Q05397 1052 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 SLC39A6Q13433 755 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 AKAP4Q5JQC9 854 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 C1orf141Q5JVX7 400 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 SEMA6BQ9H3T3 888 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 TAF1DQ9H5J8 278 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-207ENST00000518716 PDE4DIPQ5VU43 2346 aa8.24□□□□□ -1.09
PABPC1-207ENST00000518716 RASSF10A6NK89 507 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 ESPNB1AK53 854 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
PABPC1-207ENST00000518716 GPC1P35052 558 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 LBX1P52954 281 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 NR6A1Q15406 480 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 TBC1D9BQ66K14 1250 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 SULT6B1Q6IMI4 303 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 PRR5LQ6MZQ0 368 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 LDHDQ86WU2 507 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 ABHD8Q96I13 439 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
PABPC1-207ENST00000518716 SLX4Q8IY92 1834 aa8.23□□□□□ -1.09
PABPC1-207ENST00000518716 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 SCN4AP35499 1836 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 TMEM88BA6NKF7 163 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 RNMTO43148 476 aaKnown RBP8.22□□□□□ -1.09
PABPC1-207ENST00000518716 EIF5BO60841 1220 aaKnown RBP8.22□□□□□ -1.09
PABPC1-207ENST00000518716 SRGNP10124 158 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 PDE6BP35913 854 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 STYK1Q6J9G0 422 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 EDARADDQ8WWZ3 215 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 TAOK3Q9H2K8 898 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 415.4 ms