RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 PRPF38BQ5VTL8 546 aaKnown RBP22.7■■□□□ 1.22
TFF3-204ENST00000518498 FAM84BQ96KN1 310 aaPredicted RBP22.7■■□□□ 1.22
TFF3-204ENST00000518498 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
TFF3-204ENST00000518498 SERPINA10Q9UK55 444 aa22.7■■□□□ 1.22
TFF3-204ENST00000518498 TRIM17Q9Y577 477 aa22.7■■□□□ 1.22
TFF3-204ENST00000518498 A0A1B0GUL6 1792 aa22.7■■□□□ 1.22
TFF3-204ENST00000518498 ECM29Q5VYK3 1845 aa22.7■■□□□ 1.22
TFF3-204ENST00000518498 PTPRCP08575 1304 aa22.69■■□□□ 1.22
TFF3-204ENST00000518498 FRAT1Q92837 279 aaPredicted RBP22.69■■□□□ 1.22
TFF3-204ENST00000518498 PUS3Q9BZE2 481 aaKnown RBP22.69■■□□□ 1.22
TFF3-204ENST00000518498 TDRD3Q9H7E2 651 aaKnown RBP22.69■■□□□ 1.22
TFF3-204ENST00000518498 SPDYE2Q495Y8 402 aa22.68■■□□□ 1.22
TFF3-204ENST00000518498 SUCLG2Q96I99 432 aa22.68■■□□□ 1.22
TFF3-204ENST00000518498 RIPOR2Q9Y4F9 1068 aa22.68■■□□□ 1.22
TFF3-204ENST00000518498 MROH5Q6ZUA9 1318 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 GJA5P36382 358 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 OTOP1Q7RTM1 612 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
TFF3-204ENST00000518498 ERO1AQ96HE7 468 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 API5Q9BZZ5 524 aaKnown RBP22.67■■□□□ 1.22
TFF3-204ENST00000518498 PCDH10Q9P2E7 1040 aa22.67■■□□□ 1.22
TFF3-204ENST00000518498 NOB1Q9ULX3 412 aaKnown RBP22.67■■□□□ 1.22
TFF3-204ENST00000518498 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
TFF3-204ENST00000518498 PDE3AQ14432 1141 aa22.66■■□□□ 1.22
TFF3-204ENST00000518498 ATF7IPQ6VMQ6 1270 aa22.66■■□□□ 1.22
TFF3-204ENST00000518498 TESPA1A2RU30 521 aaPredicted RBP22.65■■□□□ 1.22
TFF3-204ENST00000518498 CRKP46108 304 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 TNNI2P48788 182 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 CRHR2Q13324 411 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 INTS3Q68E01 1043 aaKnown RBP22.65■■□□□ 1.22
TFF3-204ENST00000518498 VPS37DQ86XT2 251 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 PTPN18Q99952 460 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 ELP3Q9H9T3 547 aa22.65■■□□□ 1.22
TFF3-204ENST00000518498 TCP10L2B9ZVM9 353 aa22.64■■□□□ 1.21
TFF3-204ENST00000518498 FBXO33Q7Z6M2 555 aa22.64■■□□□ 1.21
TFF3-204ENST00000518498 OPTNQ96CV9 577 aa22.64■■□□□ 1.21
TFF3-204ENST00000518498 TEPSINQ96N21 525 aa22.64■■□□□ 1.21
TFF3-204ENST00000518498 UTYO14607 1347 aa22.63■■□□□ 1.21
TFF3-204ENST00000518498 FRAT2O75474 233 aaPredicted RBP22.63■■□□□ 1.21
TFF3-204ENST00000518498 CAVIN4Q5BKX8 364 aa22.63■■□□□ 1.21
TFF3-204ENST00000518498 PTPN22Q9Y2R2 807 aa22.63■■□□□ 1.21
TFF3-204ENST00000518498 MAP3K9P80192 1104 aa22.62■■□□□ 1.21
TFF3-204ENST00000518498 SP3Q02447 781 aa22.62■■□□□ 1.21
TFF3-204ENST00000518498 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
TFF3-204ENST00000518498 CD99L2Q8TCZ2 262 aa22.62■■□□□ 1.21
TFF3-204ENST00000518498 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
TFF3-204ENST00000518498 IQSEC3Q9UPP2 1182 aaPredicted RBP22.62■■□□□ 1.21
TFF3-204ENST00000518498 HDLBPQ00341 1268 aaKnown RBP22.61■■□□□ 1.21
TFF3-204ENST00000518498 CHAF1AQ13111 956 aaPredicted RBP22.61■■□□□ 1.21
TFF3-204ENST00000518498 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
TFF3-204ENST00000518498 LRRC24Q50LG9 513 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 METTL24Q5JXM2 366 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.61■■□□□ 1.21
TFF3-204ENST00000518498 TBC1D22AQ8WUA7 517 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 MS4A4AQ96JQ5 239 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
TFF3-204ENST00000518498 PDE8BO95263 885 aa22.6■■□□□ 1.21
TFF3-204ENST00000518498 TRIM27P14373 513 aa22.6■■□□□ 1.21
TFF3-204ENST00000518498 GRIK5Q16478 980 aa22.6■■□□□ 1.21
TFF3-204ENST00000518498 CDAN1Q8IWY9 1227 aa22.6■■□□□ 1.21
TFF3-204ENST00000518498 LAMB1P07942 1786 aa22.6■■□□□ 1.21
TFF3-204ENST00000518498 GTF2A2P52657 109 aa22.59■■□□□ 1.21
TFF3-204ENST00000518498 MRIQ9BWK5 157 aa22.59■■□□□ 1.21
TFF3-204ENST00000518498 CSADQ9Y600 493 aa22.59■■□□□ 1.21
TFF3-204ENST00000518498 PDE4DIPQ5VU43 2346 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 VGLL4Q14135 290 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 ANKRD44Q8N8A2 993 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.58■■□□□ 1.21
TFF3-204ENST00000518498 CNKSR2Q8WXI2 1034 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 TEKT1Q969V4 418 aa22.58■■□□□ 1.21
TFF3-204ENST00000518498 CCL15-CCL14A0A0B4J2E2 113 aa22.57■■□□□ 1.2
TFF3-204ENST00000518498 POTEFA5A3E0 1075 aa22.57■■□□□ 1.2
TFF3-204ENST00000518498 ARHGEF6Q15052 776 aa22.57■■□□□ 1.2
TFF3-204ENST00000518498 CCL15Q16663 113 aa22.57■■□□□ 1.2
TFF3-204ENST00000518498 ZFYVE28Q9HCC9 887 aa22.57■■□□□ 1.2
TFF3-204ENST00000518498 BCAMP50895 628 aa22.56■■□□□ 1.2
TFF3-204ENST00000518498 VGLL2Q8N8G2 317 aa22.56■■□□□ 1.2
TFF3-204ENST00000518498 BRI3BPQ8WY22 251 aa22.56■■□□□ 1.2
TFF3-204ENST00000518498 CACNB3P54284 484 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 TAF1CQ15572 869 aaPredicted RBP22.55■■□□□ 1.2
TFF3-204ENST00000518498 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 CLUAP1Q96AJ1 413 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 ARMC5Q96C12 935 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 OTUD5Q96G74 571 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 ZDHHC15Q96MV8 337 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 CHMP4BQ9H444 224 aaKnown RBP22.55■■□□□ 1.2
TFF3-204ENST00000518498 TMOD2Q9NZR1 351 aa22.55■■□□□ 1.2
TFF3-204ENST00000518498 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
TFF3-204ENST00000518498 FAM83AQ86UY5 434 aa22.54■■□□□ 1.2
TFF3-204ENST00000518498 HOOK2Q96ED9 719 aa22.54■■□□□ 1.2
TFF3-204ENST00000518498 SUGT1Q9Y2Z0 365 aa22.54■■□□□ 1.2
TFF3-204ENST00000518498 WDHD1O75717 1129 aaPredicted RBP22.53■■□□□ 1.2
TFF3-204ENST00000518498 CAP1Q01518 475 aa22.53■■□□□ 1.2
TFF3-204ENST00000518498 FAM43AQ8N2R8 423 aa22.53■■□□□ 1.2
TFF3-204ENST00000518498 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
TFF3-204ENST00000518498 GCC1Q96CN9 775 aa22.53■■□□□ 1.2
TFF3-204ENST00000518498 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms