RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 TTF2Q9UNY4 1162 aaKnown RBP14.9□□□□□ -0.02
TMEM55A-202ENST00000518359 CHMP3Q9Y3E7 222 aa14.9□□□□□ -0.02
TMEM55A-202ENST00000518359 FAM205AQ6ZU69 1335 aa14.9□□□□□ -0.02
TMEM55A-202ENST00000518359 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 TWISTNBQ3B726 338 aaPredicted RBP14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 G2E3Q7L622 706 aa14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 DPF3Q92784 378 aa14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 TEPSINQ96N21 525 aa14.89□□□□□ -0.03
TMEM55A-202ENST00000518359 SPDYE5A6NIY4 337 aa14.88□□□□□ -0.03
TMEM55A-202ENST00000518359 TCP10L2B9ZVM9 353 aa14.88□□□□□ -0.03
TMEM55A-202ENST00000518359 FLIIQ13045 1269 aa14.88□□□□□ -0.03
TMEM55A-202ENST00000518359 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
TMEM55A-202ENST00000518359 NKX2-3Q8TAU0 364 aa14.88□□□□□ -0.03
TMEM55A-202ENST00000518359 CCDC57Q2TAC2 916 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 ERO1BQ86YB8 467 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 DZIP1LQ8IYY4 767 aaKnown RBP14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 TSR2Q969E8 191 aaKnown RBP14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 HOOK2Q96ED9 719 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 HTATIP2Q9BUP3 242 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 TMEM39BQ9GZU3 492 aa14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
TMEM55A-202ENST00000518359 PLIN1O60240 522 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 CRKP46108 304 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 SNAPC2Q13487 334 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 CDAN1Q8IWY9 1227 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 TDRD7Q8NHU6 1098 aaKnown RBP14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 ARHGAP39Q9C0H5 1083 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
TMEM55A-202ENST00000518359 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 HOXD10P28358 340 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 FOXO4P98177 505 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 TMOD2Q9NZR1 351 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 RBM27Q9P2N5 1060 aaKnown RBP14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
TMEM55A-202ENST00000518359 PPIL2Q13356 520 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 MGAMO43451 1857 aa14.84□□□□□ -0.03
TMEM55A-202ENST00000518359 IRF6O14896 467 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 GYG1P46976 350 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 HDLBPQ00341 1268 aaKnown RBP14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 SLC17A8Q8NDX2 589 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 SRRDQ9UH36 339 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 AK9Q5TCS8 1911 aa14.83□□□□□ -0.04
TMEM55A-202ENST00000518359 MYH13Q9UKX3 1938 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 DLL1O00548 723 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 GJB1P08034 283 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 GRK4P32298 578 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 PSMC4P43686 418 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 GJA8P48165 433 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 UBXN2AP68543 259 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 MTFR1Q15390 333 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 C17orf99Q6UX52 265 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 VPS37DQ86XT2 251 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 TBC1D22AQ8WUA7 517 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 TEKT1Q969V4 418 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 ZNF594Q96JF6 807 aaPredicted RBP14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 TRIM47Q96LD4 638 aa14.82□□□□□ -0.04
TMEM55A-202ENST00000518359 A0A1W2PPC1 479 aa14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 FMNL1O95466 1100 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 PPATQ06203 517 aa14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 ANKRD23Q86SG2 305 aa14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 FAM84BQ96KN1 310 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 PRKRIP1Q9H875 184 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 BIN2Q9UBW5 565 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 MYPNQ86TC9 1320 aa14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 RPAP1Q9BWH6 1393 aaPredicted RBP14.81□□□□□ -0.04
TMEM55A-202ENST00000518359 ECM2O94769 699 aaPredicted RBP14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 CCL5P13501 91 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 OSBPP22059 807 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 CACNB3P54284 484 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 CCDC27Q2M243 656 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 ZNF341Q9BYN7 854 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 CPA4Q9UI42 421 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 MAST3O60307 1309 aa14.8□□□□□ -0.04
TMEM55A-202ENST00000518359 GRM8O00222 908 aa14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 PDHXO00330 501 aa14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 COL6A3P12111 3177 aa14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 IL16Q14005 1332 aa14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 CAVIN4Q5BKX8 364 aa14.79□□□□□ -0.04
TMEM55A-202ENST00000518359 BEND3Q5T5X7 828 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms