RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
HOXA13-202ENST00000518136 SMC5Q8IY18 1101 aa10.39□□□□□ -0.75
HOXA13-202ENST00000518136 UTP14AQ9BVJ6 771 aaKnown RBP10.39□□□□□ -0.75
HOXA13-202ENST00000518136 CHMP4BQ9H444 224 aaKnown RBP10.39□□□□□ -0.75
HOXA13-202ENST00000518136 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
HOXA13-202ENST00000518136 TRMT112Q9UI30 125 aaKnown RBP10.39□□□□□ -0.75
HOXA13-202ENST00000518136 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
HOXA13-202ENST00000518136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
HOXA13-202ENST00000518136 RIC1Q4ADV7 1423 aa10.39□□□□□ -0.75
HOXA13-202ENST00000518136 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
HOXA13-202ENST00000518136 IRS4O14654 1257 aaPredicted RBP10.38□□□□□ -0.75
HOXA13-202ENST00000518136 PPEF1O14829 653 aaPredicted RBP10.38□□□□□ -0.75
HOXA13-202ENST00000518136 DXOO77932 396 aaKnown RBP10.38□□□□□ -0.75
HOXA13-202ENST00000518136 CSF1RP07333 972 aa10.38□□□□□ -0.75
HOXA13-202ENST00000518136 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
HOXA13-202ENST00000518136 MSL1Q68DK7 614 aa10.38□□□□□ -0.75
HOXA13-202ENST00000518136 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
HOXA13-202ENST00000518136 HELBQ8NG08 1087 aaPredicted RBP10.38□□□□□ -0.75
HOXA13-202ENST00000518136 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
HOXA13-202ENST00000518136 SH3TC1Q8TE82 1336 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 SRGAP3O43295 1099 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 PRR5LQ6MZQ0 368 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 LMBR1LQ6UX01 489 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 CENPQQ7L2Z9 268 aaPredicted RBP10.37□□□□□ -0.75
HOXA13-202ENST00000518136 TTLL11Q8NHH1 800 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 KLHDC4Q8TBB5 520 aa10.37□□□□□ -0.75
HOXA13-202ENST00000518136 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
HOXA13-202ENST00000518136 AP1G2O75843 785 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 CTSWP56202 376 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 PTPN12Q05209 780 aaKnown RBP10.36□□□□□ -0.75
HOXA13-202ENST00000518136 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 FLAD1Q8NFF5 587 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 RWDD1Q9H446 243 aaPredicted RBP10.36□□□□□ -0.75
HOXA13-202ENST00000518136 GREM2Q9H772 168 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
HOXA13-202ENST00000518136 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 PDE8AO60658 829 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 SERPINB2P05120 415 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 MMP10P09238 476 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 HMGB2P26583 209 aaKnown RBP10.35□□□□□ -0.75
HOXA13-202ENST00000518136 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 NBPF5PQ86XG9 351 aaPredicted RBP10.35□□□□□ -0.75
HOXA13-202ENST00000518136 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
HOXA13-202ENST00000518136 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 NOP58Q9Y2X3 529 aaKnown RBP10.35□□□□□ -0.75
HOXA13-202ENST00000518136 MYO5AQ9Y4I1 1855 aaKnown RBP10.35□□□□□ -0.75
HOXA13-202ENST00000518136 RTL9Q8NET4 1388 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
HOXA13-202ENST00000518136 NUCB1Q02818 461 aa10.34□□□□□ -0.75
HOXA13-202ENST00000518136 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
HOXA13-202ENST00000518136 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
HOXA13-202ENST00000518136 ZNF594Q96JF6 807 aaPredicted RBP10.34□□□□□ -0.75
HOXA13-202ENST00000518136 COPRSQ9NQ92 184 aa10.34□□□□□ -0.75
HOXA13-202ENST00000518136 FCF1Q9Y324 198 aaKnown RBP10.34□□□□□ -0.75
HOXA13-202ENST00000518136 C10orf71Q711Q0 1435 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 SMARCA5O60264 1052 aaPredicted RBP10.33□□□□□ -0.76
HOXA13-202ENST00000518136 SASH1O94885 1247 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
HOXA13-202ENST00000518136 SF3B3Q15393 1217 aaKnown RBP10.33□□□□□ -0.76
HOXA13-202ENST00000518136 PTPRNQ16849 979 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 ATG9AQ7Z3C6 839 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 NLGN1Q8N2Q7 840 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 CNBD1Q8NA66 436 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 OTUD7AQ8TE49 926 aaPredicted RBP10.33□□□□□ -0.76
HOXA13-202ENST00000518136 NUDT12Q9BQG2 462 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
HOXA13-202ENST00000518136 NYXQ9GZU5 481 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 SEC31BQ9NQW1 1179 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 MYH13Q9UKX3 1938 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 SALL3Q9BXA9 1300 aa10.33□□□□□ -0.76
HOXA13-202ENST00000518136 HMMRO75330 724 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 ITGA6P23229 1130 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 LRRC24Q50LG9 513 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 TPTE2Q6XPS3 522 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 SIL1Q9H173 461 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 HDAC5Q9UQL6 1122 aa10.32□□□□□ -0.76
HOXA13-202ENST00000518136 CHD4Q14839 1912 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
HOXA13-202ENST00000518136 APBB1O00213 710 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 SURF6O75683 361 aaKnown RBP10.31□□□□□ -0.76
HOXA13-202ENST00000518136 CCNYL3P0C7X3 344 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 CRY2Q49AN0 593 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
HOXA13-202ENST00000518136 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 CHMP3Q9Y3E7 222 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 ZNF609O15014 1411 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 MYH7P12883 1935 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 DUOX1Q9NRD9 1551 aa10.31□□□□□ -0.76
HOXA13-202ENST00000518136 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
HOXA13-202ENST00000518136 ZBTB7AO95365 584 aa10.3□□□□□ -0.76
HOXA13-202ENST00000518136 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
HOXA13-202ENST00000518136 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
HOXA13-202ENST00000518136 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
HOXA13-202ENST00000518136 RIPOR2Q9Y4F9 1068 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms