RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 A0A0C4DFX4 3053 aa14.47□□□□□ -0.09
CTNNA1-205ENST00000517904 CACNA1FO60840 1977 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 PLIN1O60240 522 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 MFSD14BQ5SR56 506 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 LMBR1LQ6UX01 489 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 WWC1Q8IX03 1113 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 TMEM39BQ9GZU3 492 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 SERPINA10Q9UK55 444 aa14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 TTF2Q9UNY4 1162 aaKnown RBP14.46□□□□□ -0.09
CTNNA1-205ENST00000517904 COL6A3P12111 3177 aa14.46□□□□□ -0.1
CTNNA1-205ENST00000517904 TCP10L2B9ZVM9 353 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 MYCP01106 439 aaPredicted RBP14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 GTF2A2P52657 109 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 CCDC27Q2M243 656 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 TDRD7Q8NHU6 1098 aaKnown RBP14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 ARHGAP39Q9C0H5 1083 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 ZFYVE28Q9HCC9 887 aa14.45□□□□□ -0.1
CTNNA1-205ENST00000517904 F6X3S4 739 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 GYG1P46976 350 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 MAP3K9P80192 1104 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 GRIK5Q16478 980 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 BEND3Q5T5X7 828 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 LDHAL6AQ6ZMR3 332 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 SH3TC2Q8TF17 1288 aa14.44□□□□□ -0.1
CTNNA1-205ENST00000517904 H0YGN5 161 aa14.43□□□□□ -0.1
CTNNA1-205ENST00000517904 CRKP46108 304 aa14.43□□□□□ -0.1
CTNNA1-205ENST00000517904 ARHGEF6Q15052 776 aa14.43□□□□□ -0.1
CTNNA1-205ENST00000517904 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
CTNNA1-205ENST00000517904 CNNM1Q9NRU3 951 aa14.43□□□□□ -0.1
CTNNA1-205ENST00000517904 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 SPDYE5A6NIY4 337 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 TLR2O60603 784 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 HIBADHP31937 336 aaKnown RBP14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 LACTBP83111 547 aaPredicted RBP14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 CCDC184Q52MB2 194 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 CSADQ9Y600 493 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
CTNNA1-205ENST00000517904 IL16Q14005 1332 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 BTBD19C9JJ37 291 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 VAMP4O75379 141 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 TNNI2P48788 182 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 CACNB3P54284 484 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 UBE4AQ14139 1066 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 TAF7LQ5H9L4 462 aa14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 PUS3Q9BZE2 481 aaKnown RBP14.41□□□□□ -0.1
CTNNA1-205ENST00000517904 GRM8O00222 908 aa14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 IRF6O14896 467 aa14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 CTGFP29279 349 aa14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 ZKSCAN4Q969J2 545 aaPredicted RBP14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 IQSEC3Q9UPP2 1182 aaPredicted RBP14.4□□□□□ -0.1
CTNNA1-205ENST00000517904 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 CETPP11597 493 aa14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 MTFR1Q15390 333 aa14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 ERO1BQ86YB8 467 aa14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
CTNNA1-205ENST00000517904 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
CTNNA1-205ENST00000517904 SNAPC2Q13487 334 aa14.38□□□□□ -0.11
CTNNA1-205ENST00000517904 KIF22Q14807 665 aa14.38□□□□□ -0.11
CTNNA1-205ENST00000517904 KAZALD1Q96I82 304 aa14.38□□□□□ -0.11
CTNNA1-205ENST00000517904 WDHD1O75717 1129 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 GNRH1P01148 92 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 HDLBPQ00341 1268 aaKnown RBP14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 CHAF1AQ13111 956 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 PPIL2Q13356 520 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 C17orf99Q6UX52 265 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 FBXO33Q7Z6M2 555 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 SUCLG2Q96I99 432 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
CTNNA1-205ENST00000517904 PRMT2P55345 433 aa14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 TEKT1Q969V4 418 aa14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 C9orf78Q9NZ63 289 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 RBM27Q9P2N5 1060 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 CPA4Q9UI42 421 aa14.36□□□□□ -0.11
CTNNA1-205ENST00000517904 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 VPS37DQ86XT2 251 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 ZDHHC15Q96MV8 337 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 MROH5Q6ZUA9 1318 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 ADGRA2Q96PE1 1338 aa14.35□□□□□ -0.11
CTNNA1-205ENST00000517904 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 OSBPP22059 807 aa14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 INPP5BP32019 993 aa14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 PSMC4P43686 418 aa14.34□□□□□ -0.11
CTNNA1-205ENST00000517904 PPATQ06203 517 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms