RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TBC1D2BQ9UPU7 963 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 ZNF292O60281 2723 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 SLIT3O75094 1523 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 CD46P15529 392 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 FSHRP23945 695 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 EPHX2P34913 555 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 IRF5Q13568 498 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 QPCTQ16769 361 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 GPRASP1Q5JY77 1395 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 PNMA8AQ86V59 439 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-204ENST00000517862 IQGAP3Q86VI3 1631 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 NUTM1Q86Y26 1132 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 LURAP1LQ8IV03 231 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 BANK1Q8NDB2 785 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 TTC21AQ8NDW8 1320 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 RNF217Q8TC41 542 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 ADAMTS19Q8TE59 1207 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 ZNF296Q8WUU4 475 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-204ENST00000517862 FAM161BQ96MY7 647 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 CCDC87Q9NVE4 849 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 EVA1BQ9NVM1 165 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 STAP2Q9UGK3 403 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 NR2E3Q9Y5X4 410 aa5.1□□□□□ -1.59
CPNE3-204ENST00000517862 USP9XQ93008 2570 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-204ENST00000517862 MOXD2PA6NHM9 499 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 TRAF5O00463 557 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 KDM4AO75164 1064 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 TAL1P17542 331 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-204ENST00000517862 NDUFV2P19404 249 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 KCNH2Q12809 1159 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 GLMNQ92990 594 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 CALR3Q96L12 384 aaKnown RBP5.09□□□□□ -1.59
CPNE3-204ENST00000517862 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-204ENST00000517862 HACL1Q9UJ83 578 aa5.09□□□□□ -1.59
CPNE3-204ENST00000517862 C5P01031 1676 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 AP1G2O75843 785 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 SPATA31C1P0DKV0 1188 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 KIF23Q02241 960 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-204ENST00000517862 PTPRNQ16849 979 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 LRIT3Q3SXY7 679 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 PPP2R2DQ66LE6 453 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 RETREG3Q86VR2 466 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 CCDC116Q8IYX3 515 aa5.08□□□□□ -1.6
CPNE3-204ENST00000517862 GTPBP3Q969Y2 492 aaKnown RBP5.08□□□□□ -1.6
CPNE3-204ENST00000517862 INSM2Q96T92 566 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-204ENST00000517862 YTHDC2Q9H6S0 1430 aaKnown RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 CNTNAP4Q9C0A0 1308 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 IFT172Q9UG01 1749 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 H7C1W4 665 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 CELF2O95319 508 aaKnown RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 USP17L8P0C7I0 530 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 HOXB4P17483 251 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 USP46P62068 366 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 TMEM259Q4ZIN3 620 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 ZNF326Q5BKZ1 582 aaKnown RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 RTL5Q5HYW3 569 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 NUTM2GQ5VZR2 741 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 RSBN1LQ6PCB5 846 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 RIPOR1Q6ZS17 1223 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 C1orf229Q6ZS94 237 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 Q6ZVU0 165 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 WAPLQ7Z5K2 1190 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 SYTL4Q96C24 671 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 ASH1LQ9NR48 2969 aaKnown RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 PGPEP1Q9NXJ5 209 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 RALYQ9UKM9 306 aaKnown RBP5.07□□□□□ -1.6
CPNE3-204ENST00000517862 PCDHB15Q9Y5E8 787 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 ABCC6O95255 1503 aa5.07□□□□□ -1.6
CPNE3-204ENST00000517862 FAM208BQ5VWN6 2430 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 WTIPA6NIX2 430 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-204ENST00000517862 NFKBIEO00221 500 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 ZBTB7BO15156 539 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-204ENST00000517862 CHRNA5P30532 468 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 DIXDC1Q155Q3 683 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 AMIGO3Q86WK7 504 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 GOLGA6L1Q8N7Z2 621 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 GZF1Q9H116 711 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-204ENST00000517862 EPHX3Q9H6B9 360 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 TOGARAM1Q9Y4F4 1720 aa5.06□□□□□ -1.6
CPNE3-204ENST00000517862 CPDO75976 1380 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 UBR3Q6ZT12 1888 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 ACIN1Q9UKV3 1341 aaKnown RBP5.05□□□□□ -1.6
CPNE3-204ENST00000517862 TAF1LQ8IZX4 1826 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 CARNS1A5YM72 827 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 HOXA2O43364 376 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 CBLBQ13191 982 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 AGERQ15109 404 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 DBN1Q16643 649 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 FAM109BQ6ICB4 259 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-204ENST00000517862 BICDL1Q6ZP65 573 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 SLC51AQ86UW1 340 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 FOXJ1Q92949 421 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 HLA-CQ95604 372 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 CDX2Q99626 313 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-204ENST00000517862 ACACBO00763 2458 aa5.05□□□□□ -1.6
CPNE3-204ENST00000517862 WDFY4Q6ZS81 3184 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 C4AP0C0L4 1744 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-204ENST00000517862 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms