RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 CCDC102BQ68D86 513 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 LRRC8AQ8IWT6 810 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 KAT14Q9H8E8 782 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 ROBO2Q9HCK4 1378 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 LDHCP07864 332 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 DNA2P51530 1060 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 KCNG4Q8TDN1 519 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 SETDB2Q96T68 719 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 UBASH3AP57075 661 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
PCDHGA1-202ENST00000517417 PRC1O43663 620 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 CRB1P82279 1406 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 H0YHG0 523 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 RXRAP19793 462 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 KIF5BP33176 963 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 KIF4BQ2VIQ3 1234 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 USP6P35125 1406 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 SPTLC2O15270 562 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 ERLIN1O75477 346 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 SYKP43405 635 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 GNG11P61952 73 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 NUP88Q99567 741 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 CRNKL1Q9BZJ0 848 aaKnown RBP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 TCP11L1Q9NUJ3 509 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 ESR2Q92731 530 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 MYO6Q9UM54 1294 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 A1BGP04217 495 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 AFMP43652 599 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 C11orf57Q6ZUT1 292 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 TLR7Q9NYK1 1049 aaKnown RBP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 A0A087WWV3 80 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 MATR3P43243 847 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
PCDHGA1-202ENST00000517417 SPA17Q15506 151 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 TMEM266Q2M3C6 531 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 FKBP15Q5T1M5 1219 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 RTN1Q16799 776 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZNF589Q86UQ0 364 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
PCDHGA1-202ENST00000517417 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 SPTY2D1Q68D10 685 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZSWIM4Q9H7M6 989 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 CPS1P31327 1500 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 KRT23Q9C075 422 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 KIF5CO60282 957 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 CDC25BP30305 580 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 MTIF2P46199 727 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 KDRP35968 1356 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 TUBB4AP04350 444 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
PCDHGA1-202ENST00000517417 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 EIF3JO75822 258 aaKnown RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 XPO4Q9C0E2 1151 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms