RNA–Protein interactions for RNA: ENST00000516958.1

RNU6-250P-201, Transcript of RNA, U6 small nuclear 250, pseudogene, humanhuman

BASIC

Gene RNU6-250P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-250P-201ENST00000516958 BMP2P12643 396 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 TIMP2P16035 220 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 YBX3P16989 372 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 GRM5P41594 1212 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 TNNT2P45379 298 aaPredicted RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 SCNN1DP51172 638 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 ERVK-9P63128 1117 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 USP4Q13107 963 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 AAMPQ13685 434 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 MTHFSDQ2M296 383 aaKnown RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 AKAP4Q5JQC9 854 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 SULT6B1Q6IMI4 303 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 ZNF530Q6P9A1 599 aaPredicted RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 INTS5Q6P9B9 1019 aaKnown RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 SMIM5Q71RC9 77 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 SLC9A9Q8IVB4 645 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 NLGN1Q8N2Q7 840 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 ZNF592Q92610 1267 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 INSM2Q96T92 566 aaPredicted RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 GPAMQ9HCL2 828 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 PGPEP1Q9NXJ5 209 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 CDV3Q9UKY7 258 aaKnown RBP2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 KNSTRNQ9Y448 316 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 ITGB4P16144 1822 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 TAF1LQ8IZX4 1826 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 UBR3Q6ZT12 1888 aa2.39□□□□□ -2.03
RNU6-250P-201ENST00000516958 CEMIPQ8WUJ3 1361 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 KCPQ6ZWJ8 1503 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 RNMTO43148 476 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SIAH2O43255 324 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 DIAPH1O60610 1272 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 LILRA1O75019 489 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 BRD1O95696 1058 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 CYP19A1P11511 503 aaPredicted RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 GYS1P13807 737 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SMPD1P17405 629 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 KCNA3P22001 575 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 MPSTP25325 297 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 MAPK1P28482 360 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 TM4SF1P30408 202 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 CRKLP46109 303 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 CABP4P57796 275 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 TGFB2P61812 414 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 DHX9Q08211 1270 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 C1orf141Q5JVX7 400 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 TRAPPC3LQ5T215 181 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 PHLDB3Q6NSJ2 640 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 TMEM214Q6NUQ4 689 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 C10orf71Q711Q0 1435 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 NPM2Q86SE8 214 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 ZNF598Q86UK7 904 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 ATCAYQ86WG3 371 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 GLYCTKQ8IVS8 523 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SIX5Q8N196 739 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 LARGE2Q8N3Y3 721 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 IL17REQ8NFR9 667 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SNIP1Q8TAD8 396 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 CLP1Q92989 425 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 AIDAQ96BJ3 306 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 NLRP3Q96P20 1036 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 POLR3GLQ9BT43 218 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SAP130Q9H0E3 1048 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SLC52A2Q9HAB3 445 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 LGR6Q9HBX8 967 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 CXXC1Q9P0U4 656 aaPredicted RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 STK17AQ9UEE5 414 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 PDZRN3Q9UPQ7 1066 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 USP20Q9Y2K6 914 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 RTCBQ9Y3I0 505 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 HCN4Q9Y3Q4 1203 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 MAP4K5Q9Y4K4 846 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 DNMT3AQ9Y6K1 912 aaPredicted RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 PXDNLA1KZ92 1463 aa2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 SOS1Q07889 1333 aaPredicted RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 USP42Q9H9J4 1324 aaKnown RBP2.38□□□□□ -2.03
RNU6-250P-201ENST00000516958 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 KIAA1551Q9HCM1 1747 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 KAT6BQ8WYB5 2073 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 SCN11AQ9UI33 1791 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 A0A1W2PRU2 124 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 A6NHS1 94 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 POLRMTO00411 1230 aaKnown RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 CAPN5O15484 640 aaPredicted RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 PTCD1O75127 700 aaKnown RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 DKK1O94907 266 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 INHAP05111 366 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 MMP10P09238 476 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 HMOX1P09601 288 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 PPP2R1AP30153 589 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 RFC4P35249 363 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 TXLNAP40222 546 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 CTSOP43234 321 aaPredicted RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 EIF5P55010 431 aaKnown RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 MCCD1P59942 119 aaPredicted RBP2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 C1QTNF8P60827 252 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 DDR1Q08345 913 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 KCNA1Q09470 495 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 NR5A1Q13285 461 aa2.37□□□□□ -2.03
RNU6-250P-201ENST00000516958 GPR162Q16538 588 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms