RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.21
SCARNA20-201ENST00000516768 CEP350Q5VT06 3117 aa13.71□□□□□ -0.21
SCARNA20-201ENST00000516768 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 LDHBP07195 334 aaKnown RBP13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 PRDX5P30044 214 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 SPATA5Q8NB90 893 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
SCARNA20-201ENST00000516768 MAST3O60307 1309 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 MCAMP43121 646 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 AAMPQ13685 434 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 DEFB115Q30KQ5 88 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 SPTY2D1Q68D10 685 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 TLL2Q9Y6L7 1015 aa13.69□□□□□ -0.22
SCARNA20-201ENST00000516768 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 APBB1O00213 710 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 AACSQ86V21 672 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 DEFB129Q9H1M3 183 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 TLR7Q9NYK1 1049 aaKnown RBP13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
SCARNA20-201ENST00000516768 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 AOX1Q06278 1338 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 CLRN2A0PK11 232 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 C2orf69Q8N8R5 385 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
SCARNA20-201ENST00000516768 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 LRRCC1Q9C099 1032 aa13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 GBA2Q9HCG7 927 aaPredicted RBP13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 PPP2R3BQ9Y5P8 575 aa13.66□□□□□ -0.22
SCARNA20-201ENST00000516768 IGSF3O75054 1194 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 VEGFBP49765 207 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 FKBP1BP68106 108 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 MECOMQ03112 1051 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 RASA3Q14644 834 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 VEZTQ9HBM0 779 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 CNTNAP1P78357 1384 aa13.65□□□□□ -0.22
SCARNA20-201ENST00000516768 ZAP70P43403 619 aa13.64□□□□□ -0.23
SCARNA20-201ENST00000516768 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
SCARNA20-201ENST00000516768 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
SCARNA20-201ENST00000516768 NSUN4Q96CB9 384 aaKnown RBP13.64□□□□□ -0.23
SCARNA20-201ENST00000516768 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
SCARNA20-201ENST00000516768 TCP10L2B9ZVM9 353 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 LDHCP07864 332 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 NF2P35240 595 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 HUNKP57058 714 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 SUPT20HL1Q3ZLR7 823 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 CDC42EP5Q6NZY7 148 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 DZIP1Q86YF9 867 aaKnown RBP13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 USP40Q9NVE5 1235 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 RAI14Q9P0K7 980 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 ARAP2Q8WZ64 1704 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 GAKO14976 1311 aa13.63□□□□□ -0.23
SCARNA20-201ENST00000516768 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 ECE1P42892 770 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 TNNI2P48788 182 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 GSTO1P78417 241 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 BCL11AQ9H165 835 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
SCARNA20-201ENST00000516768 ATP5JP18859 108 aa13.61□□□□□ -0.23
SCARNA20-201ENST00000516768 CACNB3P54284 484 aa13.61□□□□□ -0.23
SCARNA20-201ENST00000516768 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms