RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.18■■□□□ 1.3
SPOP-220ENST00000515508 RBBP6Q7Z6E9 1792 aaKnown RBP23.18■■□□□ 1.3
SPOP-220ENST00000515508 PRPF38BQ5VTL8 546 aaKnown RBP23.17■■□□□ 1.3
SPOP-220ENST00000515508 CDAN1Q8IWY9 1227 aa23.17■■□□□ 1.3
SPOP-220ENST00000515508 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
SPOP-220ENST00000515508 PTPRCP08575 1304 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 HDLBPQ00341 1268 aaKnown RBP23.16■■□□□ 1.3
SPOP-220ENST00000515508 CRHR2Q13324 411 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 LRRC24Q50LG9 513 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 OTUD7BQ6GQQ9 843 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 OTOP1Q7RTM1 612 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 PTPN18Q99952 460 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 TRIM17Q9Y577 477 aa23.16■■□□□ 1.3
SPOP-220ENST00000515508 GRIK5Q16478 980 aa23.15■■□□□ 1.3
SPOP-220ENST00000515508 VPS37DQ86XT2 251 aa23.15■■□□□ 1.3
SPOP-220ENST00000515508 TBC1D22AQ8WUA7 517 aa23.15■■□□□ 1.3
SPOP-220ENST00000515508 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
SPOP-220ENST00000515508 ELP3Q9H9T3 547 aa23.15■■□□□ 1.3
SPOP-220ENST00000515508 MYH13Q9UKX3 1938 aa23.14■■□□□ 1.3
SPOP-220ENST00000515508 PDE8BO95263 885 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 TNNI2P48788 182 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 CAVIN4Q5BKX8 364 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 METTL24Q5JXM2 366 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.14■■□□□ 1.29
SPOP-220ENST00000515508 ERO1AQ96HE7 468 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 MS4A4AQ96JQ5 239 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 TMEM39BQ9GZU3 492 aa23.14■■□□□ 1.29
SPOP-220ENST00000515508 IQSEC3Q9UPP2 1182 aaPredicted RBP23.14■■□□□ 1.29
SPOP-220ENST00000515508 KIF16BQ96L93 1317 aa23.13■■□□□ 1.29
SPOP-220ENST00000515508 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
SPOP-220ENST00000515508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPOP-220ENST00000515508 MKI67P46013 3256 aaKnown RBP23.13■■□□□ 1.29
SPOP-220ENST00000515508 VGLL4Q14135 290 aa23.12■■□□□ 1.29
SPOP-220ENST00000515508 BRCA2P51587 3418 aa23.12■■□□□ 1.29
SPOP-220ENST00000515508 CHAF1AQ13111 956 aaPredicted RBP23.11■■□□□ 1.29
SPOP-220ENST00000515508 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
SPOP-220ENST00000515508 USP44Q9H0E7 712 aa23.11■■□□□ 1.29
SPOP-220ENST00000515508 FRAT2O75474 233 aaPredicted RBP23.1■■□□□ 1.29
SPOP-220ENST00000515508 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
SPOP-220ENST00000515508 KLHDC4Q8TBB5 520 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 CD99L2Q8TCZ2 262 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 CNKSR2Q8WXI2 1034 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 ZDHHC15Q96MV8 337 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 PTPN22Q9Y2R2 807 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 SUGT1Q9Y2Z0 365 aa23.1■■□□□ 1.29
SPOP-220ENST00000515508 E9PSI1 815 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 FGFR2P21802 821 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 BCAMP50895 628 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 SP3Q02447 781 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 PUM3Q15397 648 aaKnown RBP23.09■■□□□ 1.29
SPOP-220ENST00000515508 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
SPOP-220ENST00000515508 RPAP1Q9BWH6 1393 aaPredicted RBP23.09■■□□□ 1.29
SPOP-220ENST00000515508 MAST3O60307 1309 aa23.08■■□□□ 1.29
SPOP-220ENST00000515508 GTF2A2P52657 109 aa23.08■■□□□ 1.29
SPOP-220ENST00000515508 FAM83AQ86UY5 434 aa23.08■■□□□ 1.29
SPOP-220ENST00000515508 CSADQ9Y600 493 aa23.08■■□□□ 1.29
SPOP-220ENST00000515508 CACNB3P54284 484 aa23.07■■□□□ 1.28
SPOP-220ENST00000515508 CAP1Q01518 475 aa23.07■■□□□ 1.28
SPOP-220ENST00000515508 FKBP1CQ5VVH2 108 aa23.07■■□□□ 1.28
SPOP-220ENST00000515508 APOBEC3HQ6NTF7 200 aaKnown RBP23.07■■□□□ 1.28
SPOP-220ENST00000515508 EFCC1Q9HA90 598 aa23.07■■□□□ 1.28
SPOP-220ENST00000515508 CCL15-CCL14A0A0B4J2E2 113 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 IFIT1P09914 478 aaKnown RBP23.06■■□□□ 1.28
SPOP-220ENST00000515508 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
SPOP-220ENST00000515508 CCL15Q16663 113 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 ARMC5Q96C12 935 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 OTUD5Q96G74 571 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 TMOD2Q9NZR1 351 aa23.06■■□□□ 1.28
SPOP-220ENST00000515508 POTEFA5A3E0 1075 aa23.05■■□□□ 1.28
SPOP-220ENST00000515508 HHIPL2Q6UWX4 724 aa23.05■■□□□ 1.28
SPOP-220ENST00000515508 PCDH10Q9P2E7 1040 aa23.05■■□□□ 1.28
SPOP-220ENST00000515508 SNCAIPQ9Y6H5 919 aa23.05■■□□□ 1.28
SPOP-220ENST00000515508 KIAA0100Q14667 2235 aaKnown RBP23.04■■□□□ 1.28
SPOP-220ENST00000515508 EYA2O00167 538 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 TAF1CQ15572 869 aaPredicted RBP23.04■■□□□ 1.28
SPOP-220ENST00000515508 ALDH1L2Q3SY69 923 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 HOOK2Q96ED9 719 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 ZFYVE28Q9HCC9 887 aa23.04■■□□□ 1.28
SPOP-220ENST00000515508 ERO1BQ86YB8 467 aa23.03■■□□□ 1.28
SPOP-220ENST00000515508 LPIN2Q92539 896 aa23.03■■□□□ 1.28
SPOP-220ENST00000515508 WRNIP1Q96S55 665 aa23.03■■□□□ 1.28
SPOP-220ENST00000515508 SLC5A1P13866 664 aa23.02■■□□□ 1.28
SPOP-220ENST00000515508 WDR66Q8TBY9 1149 aa23.02■■□□□ 1.28
SPOP-220ENST00000515508 ZCCHC17Q9NP64 241 aaKnown RBP23.02■■□□□ 1.28
SPOP-220ENST00000515508 ATG9AQ7Z3C6 839 aa23.01■■□□□ 1.27
SPOP-220ENST00000515508 ZSWIM8A7E2V4 1837 aa23.01■■□□□ 1.27
SPOP-220ENST00000515508 CETPP11597 493 aa23■■□□□ 1.27
SPOP-220ENST00000515508 PPIL2Q13356 520 aa23■■□□□ 1.27
SPOP-220ENST00000515508 ARHGEF6Q15052 776 aa23■■□□□ 1.27
SPOP-220ENST00000515508 DCAF15Q66K64 600 aa23■■□□□ 1.27
SPOP-220ENST00000515508 ZKSCAN4Q969J2 545 aaPredicted RBP23■■□□□ 1.27
SPOP-220ENST00000515508 FBXO3Q9UK99 471 aa23■■□□□ 1.27
SPOP-220ENST00000515508 IRF6O14896 467 aa22.99■■□□□ 1.27
SPOP-220ENST00000515508 ZNF333Q96JL9 665 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms