RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 E2F4Q16254 413 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 NBPF6Q5VWK0 638 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 DPF2Q92785 391 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 NBPF4Q96M43 638 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 A1CFQ9NQ94 594 aaKnown RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 KDRP35968 1356 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 RFX7Q2KHR2 1363 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 SALL1Q9NSC2 1324 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 SPTLC2O15270 562 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 MAP2K1Q02750 393 aaPredicted RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 WHAMMP3Q1A5X7 153 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 WDR93Q6P2C0 686 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 NAA15Q9BXJ9 866 aaKnown RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 AKAP12Q02952 1782 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 BIN1O00499 593 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 FOXO3O43524 673 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 BRAPQ7Z569 592 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
SMAD1-215ENST00000515385 ARHGEF25Q86VW2 580 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 STAG1Q8WVM7 1258 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 PNKPQ96T60 521 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 CCDC9Q9Y3X0 531 aaKnown RBP14.66□□□□□ -0.06
SMAD1-215ENST00000515385 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 MAP3K19Q56UN5 1328 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
SMAD1-215ENST00000515385 SHOX2O60902 331 aaPredicted RBP14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CLSTN1O94985 981 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 MNAT1P51948 309 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 MAP9Q49MG5 647 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 SPECC1LQ69YQ0 1117 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 TOGARAM2Q6ZUX3 1019 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CTAGE15A4D2H0 777 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 GNAT3A8MTJ3 354 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 HOXB7P09629 217 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CTAGE8P0CG41 777 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 SF3B2Q13435 895 aaKnown RBP14.65□□□□□ -0.06
SMAD1-215ENST00000515385 TAF7Q15545 349 aaPredicted RBP14.65□□□□□ -0.06
SMAD1-215ENST00000515385 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CTAGE6Q86UF2 777 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 CTAGE4Q8IX94 777 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 TC2NQ8N9U0 490 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 PANX2Q96RD6 677 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 AGXT2Q9BYV1 514 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 SIL1Q9H173 461 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 C19orf44Q9H6X5 657 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 SUFUQ9UMX1 484 aa14.65□□□□□ -0.06
SMAD1-215ENST00000515385 EBAG9O00559 213 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 RNF40O75150 1001 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 CALRP27797 417 aaKnown RBP14.64□□□□□ -0.07
SMAD1-215ENST00000515385 HNRNPH1P31943 449 aaKnown RBP14.64□□□□□ -0.07
SMAD1-215ENST00000515385 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 ZNF274Q96GC6 653 aaPredicted RBP14.64□□□□□ -0.07
SMAD1-215ENST00000515385 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 USP31Q70CQ4 1352 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 CTAGE9A4FU28 777 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 GOLIM4O00461 696 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 PDILTQ8N807 584 aa14.64□□□□□ -0.07
SMAD1-215ENST00000515385 PHAXQ9H814 394 aaKnown RBP14.64□□□□□ -0.07
SMAD1-215ENST00000515385 PUF60Q9UHX1 559 aaKnown RBP14.64□□□□□ -0.07
SMAD1-215ENST00000515385 ATXN2Q99700 1313 aaKnown RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 TMEM232C9JQI7 657 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 PRPF6O94906 941 aaKnown RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 PFKFB1P16118 471 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 VSNL1P62760 191 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 FAM43BQ6ZT52 329 aaPredicted RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 ZNF589Q86UQ0 364 aaPredicted RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 ELOA2Q8IYF1 753 aaPredicted RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
SMAD1-215ENST00000515385 MYO1AQ9UBC5 1043 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 MYO5BQ9ULV0 1848 aa14.63□□□□□ -0.07
SMAD1-215ENST00000515385 A6NNZ2 444 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 EXOC5O00471 708 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 TDO2P48775 406 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 TUBB8Q3ZCM7 444 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 SMARCC1Q92922 1105 aaPredicted RBP14.62□□□□□ -0.07
SMAD1-215ENST00000515385 ZSWIM4Q9H7M6 989 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 CARMIL3Q8ND23 1372 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
SMAD1-215ENST00000515385 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 FANCLQ9NW38 375 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 CLIC4Q9Y696 253 aa14.62□□□□□ -0.07
SMAD1-215ENST00000515385 FAM237AA0A1B0GTK4 181 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 SYKP43405 635 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 DDR1Q08345 913 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 GOLGA8FQ08AF8 430 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 GOLGA8DPQ0D2H9 430 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
SMAD1-215ENST00000515385 SPATS2Q86XZ4 545 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms