RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
AP3S1-208ENST00000515066 MECOMQ03112 1051 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 DACT2Q5SW24 774 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 ADGRA1Q86SQ6 560 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 RUFY2Q8WXA3 655 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 MXD3Q9BW11 206 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
AP3S1-208ENST00000515066 TIAM2Q8IVF5 1701 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 HELLSQ9NRZ9 838 aa20.26■□□□□ 0.83
AP3S1-208ENST00000515066 USP17L3A6NCW0 530 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 USP17L4A6NCW7 530 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 M0R2C6 588 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 LDHBP07195 334 aaKnown RBP20.25■□□□□ 0.83
AP3S1-208ENST00000515066 MCMDC2Q4G0Z9 681 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
AP3S1-208ENST00000515066 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 USP17L1Q7RTZ2 530 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
AP3S1-208ENST00000515066 FBXW7Q969H0 707 aa20.24■□□□□ 0.83
AP3S1-208ENST00000515066 IGSF3O75054 1194 aa20.23■□□□□ 0.83
AP3S1-208ENST00000515066 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
AP3S1-208ENST00000515066 NAA16Q6N069 864 aaPredicted RBP20.23■□□□□ 0.83
AP3S1-208ENST00000515066 SUGT1Q9Y2Z0 365 aa20.23■□□□□ 0.83
AP3S1-208ENST00000515066 REC8O95072 547 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 CYP7A1P22680 504 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
AP3S1-208ENST00000515066 LSG1Q9H089 658 aaKnown RBP20.22■□□□□ 0.83
AP3S1-208ENST00000515066 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 PSMD14O00487 310 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 RAD17O75943 681 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 DIXDC1Q155Q3 683 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 JDP2Q8WYK2 163 aa20.22■□□□□ 0.83
AP3S1-208ENST00000515066 FOCADQ5VW36 1801 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 BAZ2AQ9UIF9 1905 aaKnown RBP20.21■□□□□ 0.83
AP3S1-208ENST00000515066 GPAA1O43292 621 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 VIL1P09327 827 aaKnown RBP20.21■□□□□ 0.83
AP3S1-208ENST00000515066 LMNB1P20700 586 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 CXCL9Q07325 125 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
AP3S1-208ENST00000515066 USP26Q9BXU7 913 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
AP3S1-208ENST00000515066 FZD9O00144 591 aa20.2■□□□□ 0.82
AP3S1-208ENST00000515066 FOXP2O15409 715 aa20.2■□□□□ 0.82
AP3S1-208ENST00000515066 PTH1RQ03431 593 aa20.2■□□□□ 0.82
AP3S1-208ENST00000515066 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
AP3S1-208ENST00000515066 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
AP3S1-208ENST00000515066 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
AP3S1-208ENST00000515066 GMLQ99445 158 aa20.19■□□□□ 0.82
AP3S1-208ENST00000515066 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
AP3S1-208ENST00000515066 GAKO14976 1311 aa20.19■□□□□ 0.82
AP3S1-208ENST00000515066 MBD4O95243 580 aa20.19■□□□□ 0.82
AP3S1-208ENST00000515066 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
AP3S1-208ENST00000515066 TTF2Q9UNY4 1162 aaKnown RBP20.19■□□□□ 0.82
AP3S1-208ENST00000515066 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
AP3S1-208ENST00000515066 MROH7-TTC4A0A0A0MT08 1334 aa20.18■□□□□ 0.82
AP3S1-208ENST00000515066 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
AP3S1-208ENST00000515066 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
AP3S1-208ENST00000515066 KIAA0825Q8IV33 1275 aa20.18■□□□□ 0.82
AP3S1-208ENST00000515066 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
AP3S1-208ENST00000515066 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
AP3S1-208ENST00000515066 STRBPQ96SI9 672 aaKnown RBP20.18■□□□□ 0.82
AP3S1-208ENST00000515066 MYO3BQ8WXR4 1341 aa20.17■□□□□ 0.82
AP3S1-208ENST00000515066 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
AP3S1-208ENST00000515066 GPR162Q16538 588 aa20.17■□□□□ 0.82
AP3S1-208ENST00000515066 FAM163AQ96GL9 167 aaPredicted RBP20.17■□□□□ 0.82
AP3S1-208ENST00000515066 TBC1D32Q96NH3 1257 aa20.17■□□□□ 0.82
AP3S1-208ENST00000515066 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
AP3S1-208ENST00000515066 HSPD1P10809 573 aaKnown RBP20.16■□□□□ 0.82
AP3S1-208ENST00000515066 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
AP3S1-208ENST00000515066 GSTO1P78417 241 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 CIAPIN1Q6FI81 312 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 KIAA1211Q6ZU35 1233 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 MAP4K1Q92918 833 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
AP3S1-208ENST00000515066 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
AP3S1-208ENST00000515066 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 SCNN1DP51172 638 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
AP3S1-208ENST00000515066 DAGLAQ9Y4D2 1042 aa20.16■□□□□ 0.82
AP3S1-208ENST00000515066 DDX60LQ5H9U9 1706 aaKnown RBP20.15■□□□□ 0.82
AP3S1-208ENST00000515066 NAV1Q8NEY1 1877 aa20.15■□□□□ 0.82
AP3S1-208ENST00000515066 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
AP3S1-208ENST00000515066 C22orf23Q9BZE7 217 aa20.15■□□□□ 0.82
AP3S1-208ENST00000515066 GPR75-ASB3A0A0A6YYF3 556 aa20.14■□□□□ 0.81
AP3S1-208ENST00000515066 LDHCP07864 332 aa20.14■□□□□ 0.81
AP3S1-208ENST00000515066 RBM25P49756 843 aaKnown RBP20.14■□□□□ 0.81
AP3S1-208ENST00000515066 PPP4CP60510 307 aa20.14■□□□□ 0.81
AP3S1-208ENST00000515066 HHIPL2Q6UWX4 724 aa20.14■□□□□ 0.81
AP3S1-208ENST00000515066 AGBL3Q8NEM8 1001 aa20.14■□□□□ 0.81
AP3S1-208ENST00000515066 HDLBPQ00341 1268 aaKnown RBP20.13■□□□□ 0.81
AP3S1-208ENST00000515066 SLF2Q8IX21 1173 aa20.13■□□□□ 0.81
AP3S1-208ENST00000515066 MRIQ9BWK5 157 aa20.13■□□□□ 0.81
AP3S1-208ENST00000515066 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
AP3S1-208ENST00000515066 RNF181Q9P0P0 153 aa20.13■□□□□ 0.81
AP3S1-208ENST00000515066 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
AP3S1-208ENST00000515066 LAMB1P07942 1786 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms