RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 ZNF417Q8TAU3 575 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 TTC9Q92623 222 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 BHMTQ93088 406 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 ANAPC16Q96DE5 110 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 ZNF587Q96SQ5 575 aaPredicted RBP5.61□□□□□ -1.51
SGCB-203ENST00000514133 OSMRQ99650 979 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 PLVAPQ9BX97 442 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 NT5C1AQ9BXI3 368 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 UBP1Q9NZI7 540 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 R3HCC1Q9Y3T6 440 aaKnown RBP5.61□□□□□ -1.51
SGCB-203ENST00000514133 CCDC85CA6NKD9 419 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 TRPA1O75762 1119 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 PF4P02776 101 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 CELA3AP09093 270 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 ACPPP15309 386 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 LIG3P49916 1009 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 TRIM28Q13263 835 aaKnown RBP5.6□□□□□ -1.51
SGCB-203ENST00000514133 SERINC3Q13530 473 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 SUZ12Q15022 739 aaKnown RBP5.6□□□□□ -1.51
SGCB-203ENST00000514133 SNAP47Q5SQN1 464 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 CACTIN-AS1Q8N1I8 211 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 DTWD1Q8N5C7 304 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 GOLM1Q8NBJ4 401 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 PHC3Q8NDX5 983 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 DCAF11Q8TEB1 546 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
SGCB-203ENST00000514133 TRIM11Q96F44 468 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 TCF12Q99081 682 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 ZKSCAN3Q9BRR0 538 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 UBE2OQ9C0C9 1292 aaKnown RBP5.6□□□□□ -1.51
SGCB-203ENST00000514133 SIRPGQ9P1W8 387 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 STRIP2Q9ULQ0 834 aa5.6□□□□□ -1.51
SGCB-203ENST00000514133 APBA3O96018 575 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 ITGB2P05107 769 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 PSAPP07602 524 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 HSD3B2P26439 372 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 SOX9P48436 509 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 APOBRQ0VD83 1088 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 CAMK2GQ13555 558 aaPredicted RBP5.59□□□□□ -1.51
SGCB-203ENST00000514133 CCNJLQ8IV13 435 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 TRPM4Q8TD43 1214 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 NKD1Q969G9 470 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 MKL1Q969V6 931 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 RHOVQ96L33 236 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 CEP44Q9C0F1 390 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 ZFYVE1Q9HBF4 777 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 ZFATQ9P243 1243 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 SLC6A14Q9UN76 642 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 STARD13Q9Y3M8 1113 aa5.59□□□□□ -1.51
SGCB-203ENST00000514133 METTL12A8MUP2 240 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 C9orf172C9J069 976 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 GREM1O60565 184 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 HOXD8P13378 290 aaPredicted RBP5.58□□□□□ -1.52
SGCB-203ENST00000514133 NID1P14543 1247 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 NFKB1P19838 968 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 LMNB1P20700 586 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 SOX18P35713 384 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 GRIA4P48058 902 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 NRLP54845 237 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 GPLD1P80108 840 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
SGCB-203ENST00000514133 HYAL2Q12891 473 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 COL9A2Q14055 689 aaPredicted RBP5.58□□□□□ -1.52
SGCB-203ENST00000514133 RAB33AQ14088 237 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 COL13A1Q5TAT6 717 aaPredicted RBP5.58□□□□□ -1.52
SGCB-203ENST00000514133 PCNX4Q63HM2 1172 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 TTBK2Q6IQ55 1244 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 CCDC81Q6ZN84 652 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 ANKRD24Q8TF21 1146 aa5.58□□□□□ -1.52
SGCB-203ENST00000514133 C1QTNF9BB2RNN3 333 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 KLF4O43474 513 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 ADAM23O75077 832 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 RGS9O75916 674 aaPredicted RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 ALBP02768 609 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 GARTP22102 1010 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 CRKP46108 304 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 BAG6P46379 1132 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 CHMP4BP1P59074 171 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 RAC1P63000 192 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 LMNB2Q03252 620 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 COL9A3Q14050 684 aaPredicted RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 PTPROQ16827 1216 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 SPRED3Q2MJR0 410 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 SEZ6Q53EL9 994 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 CD163Q86VB7 1156 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 ASAP3Q8TDY4 903 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 GPATCH3Q96I76 525 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 NSUN5Q96P11 429 aaKnown RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 SRRTQ9BXP5 876 aaKnown RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 KCNQ5Q9NR82 932 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 DNAJB12Q9NXW2 375 aaKnown RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 SNTG2Q9NY99 539 aa5.57□□□□□ -1.52
SGCB-203ENST00000514133 TLR7Q9NYK1 1049 aaKnown RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 GPN3Q9UHW5 284 aaPredicted RBP5.57□□□□□ -1.52
SGCB-203ENST00000514133 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SGCB-203ENST00000514133 FAM221BA6H8Z2 402 aa5.56□□□□□ -1.52
SGCB-203ENST00000514133 ENC1O14682 589 aa5.56□□□□□ -1.52
SGCB-203ENST00000514133 TLR3O15455 904 aaKnown RBP5.56□□□□□ -1.52
SGCB-203ENST00000514133 KIF4AO95239 1232 aa5.56□□□□□ -1.52
SGCB-203ENST00000514133 ELNP15502 786 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms