RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 ARID4AP29374 1257 aaPredicted RBP11.9□□□□□ -0.5
TPM3-221ENST00000513769 CHRNDQ07001 517 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 RABEP1Q15276 862 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 PRR5LQ6MZQ0 368 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
TPM3-221ENST00000513769 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
TPM3-221ENST00000513769 SEMA3EO15041 775 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
TPM3-221ENST00000513769 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 HSPA4P34932 840 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 PDE6BP35913 854 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 MCM2P49736 904 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 GRAPQ13588 217 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 E2F4Q16254 413 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 PROX2Q3B8N5 592 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
TPM3-221ENST00000513769 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
TPM3-221ENST00000513769 MAP4K1Q92918 833 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 KCNB2Q92953 911 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 KIF2CQ99661 725 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM3-221ENST00000513769 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 PLA2G2EQ9NZK7 142 aa11.89□□□□□ -0.51
TPM3-221ENST00000513769 ZNF609O15014 1411 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 RNF113AO15541 343 aaKnown RBP11.88□□□□□ -0.51
TPM3-221ENST00000513769 GPR162Q16538 588 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 C15orf52Q6ZUT6 534 aaKnown RBP11.88□□□□□ -0.51
TPM3-221ENST00000513769 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
TPM3-221ENST00000513769 ANO2Q9NQ90 1003 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 DDX60Q8IY21 1712 aaKnown RBP11.88□□□□□ -0.51
TPM3-221ENST00000513769 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
TPM3-221ENST00000513769 LAMB2P55268 1798 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 COL24A1Q17RW2 1714 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 PTPN5P54829 565 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 C1QTNF8P60827 252 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM3-221ENST00000513769 NECTIN1Q15223 517 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
TPM3-221ENST00000513769 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
TPM3-221ENST00000513769 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
TPM3-221ENST00000513769 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
TPM3-221ENST00000513769 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 GOLIM4O00461 696 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 TAF5LO75529 589 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
TPM3-221ENST00000513769 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
TPM3-221ENST00000513769 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 DENND2AQ9ULE3 1009 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
TPM3-221ENST00000513769 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
TPM3-221ENST00000513769 NPR1P16066 1061 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 ADORA1P30542 326 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
TPM3-221ENST00000513769 NBR1Q14596 966 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 GRIPAP1Q4V328 841 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 SPATA5Q8NB90 893 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
TPM3-221ENST00000513769 WNT2BQ93097 391 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
TPM3-221ENST00000513769 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 PSMA5P28066 241 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 POLD1P28340 1107 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 MCAMP43121 646 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 ZAP70P43403 619 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 DDR1Q08345 913 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 FAM84BQ96KN1 310 aaPredicted RBP11.84□□□□□ -0.51
TPM3-221ENST00000513769 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
TPM3-221ENST00000513769 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
TPM3-221ENST00000513769 CTNNA3Q9UI47 895 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
TPM3-221ENST00000513769 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
TPM3-221ENST00000513769 SRGNP10124 158 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms