RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TTF2Q9UNY4 1162 aaKnown RBP12.25□□□□□ -0.45
TCOF1-212ENST00000513538 CCDC57Q2TAC2 916 aa12.24□□□□□ -0.45
TCOF1-212ENST00000513538 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
TCOF1-212ENST00000513538 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
TCOF1-212ENST00000513538 TMEM39BQ9GZU3 492 aa12.24□□□□□ -0.45
TCOF1-212ENST00000513538 BRCA2P51587 3418 aa12.24□□□□□ -0.45
TCOF1-212ENST00000513538 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 EN2P19622 333 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-212ENST00000513538 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
TCOF1-212ENST00000513538 CRKP46108 304 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 SP3Q02447 781 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
TCOF1-212ENST00000513538 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
TCOF1-212ENST00000513538 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-212ENST00000513538 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-212ENST00000513538 CACNB3P54284 484 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 TNFAIP1Q13829 316 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 VGLL4Q14135 290 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 FAM43AQ8N2R8 423 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.22□□□□□ -0.45
TCOF1-212ENST00000513538 MRS2Q9HD23 443 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
TCOF1-212ENST00000513538 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 CCL15-CCL14A0A0B4J2E2 113 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 ALDH1L1O75891 902 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 CCL15Q16663 113 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 HABP4Q5JVS0 413 aaKnown RBP12.21□□□□□ -0.45
TCOF1-212ENST00000513538 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 FBXO33Q7Z6M2 555 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-212ENST00000513538 PTCH2Q9Y6C5 1203 aa12.21□□□□□ -0.45
TCOF1-212ENST00000513538 UTYO14607 1347 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-212ENST00000513538 LRRC24Q50LG9 513 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 ANKRD44Q8N8A2 993 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 VGLL2Q8N8G2 317 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 ARHGAP39Q9C0H5 1083 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 SNCAIPQ9Y6H5 919 aa12.2□□□□□ -0.46
TCOF1-212ENST00000513538 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
TCOF1-212ENST00000513538 GTF2A2P52657 109 aa12.19□□□□□ -0.46
TCOF1-212ENST00000513538 CHAF1AQ13111 956 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-212ENST00000513538 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-212ENST00000513538 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
TCOF1-212ENST00000513538 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
TCOF1-212ENST00000513538 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
TCOF1-212ENST00000513538 BICC1Q9H694 974 aaKnown RBP12.19□□□□□ -0.46
TCOF1-212ENST00000513538 MROH5Q6ZUA9 1318 aa12.18□□□□□ -0.46
TCOF1-212ENST00000513538 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
TCOF1-212ENST00000513538 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-212ENST00000513538 CSADQ9Y600 493 aa12.18□□□□□ -0.46
TCOF1-212ENST00000513538 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
TCOF1-212ENST00000513538 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-212ENST00000513538 TNNI2P48788 182 aa12.17□□□□□ -0.46
TCOF1-212ENST00000513538 BCAMP50895 628 aa12.17□□□□□ -0.46
TCOF1-212ENST00000513538 HDLBPQ00341 1268 aaKnown RBP12.17□□□□□ -0.46
TCOF1-212ENST00000513538 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
TCOF1-212ENST00000513538 ZKSCAN4Q969J2 545 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-212ENST00000513538 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
TCOF1-212ENST00000513538 WRNIP1Q96S55 665 aa12.17□□□□□ -0.46
TCOF1-212ENST00000513538 IRF6O14896 467 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 CTGFP29279 349 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-212ENST00000513538 FXR1P51114 621 aaKnown RBP eCLIP12.16□□□□□ -0.46
TCOF1-212ENST00000513538 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 ZDHHC15Q96MV8 337 aa12.16□□□□□ -0.46
TCOF1-212ENST00000513538 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-212ENST00000513538 ZNF521Q96K83 1311 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 TLR2O60603 784 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 PDE8BO95263 885 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 FGFR2P21802 821 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-212ENST00000513538 FAM83AQ86UY5 434 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 VPS37DQ86XT2 251 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
TCOF1-212ENST00000513538 MGAMO43451 1857 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 ADGRA2Q96PE1 1338 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 CEP290O15078 2479 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-212ENST00000513538 CETPP11597 493 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 INPP5BP32019 993 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-212ENST00000513538 PPIL2Q13356 520 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
TCOF1-212ENST00000513538 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-212ENST00000513538 SHISA4Q96DD7 197 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms