RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 BCAMP50895 628 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 NUCB1Q02818 461 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 DOK7Q18PE1 504 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 CCDC158Q5M9N0 1113 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 CCDC102BQ68D86 513 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 CHD1LQ86WJ1 897 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 TDRD7Q8NHU6 1098 aaKnown RBP9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 GPATCH3Q96I76 525 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 CCDC8Q9H0W5 538 aaPredicted RBP9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 COL1A1P02452 1464 aaPredicted RBP9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 UQCRFS1P1P0C7P4 283 aa9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 EIF6P56537 245 aaKnown RBP9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 TTC39AQ5SRH9 613 aa9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 ZNF512BQ96KM6 892 aaPredicted RBP9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 PDS5AQ29RF7 1337 aaKnown RBP9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 FAM205AQ6ZU69 1335 aa9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 SALL3Q9BXA9 1300 aa9.28□□□□□ -0.92
HMGXB3-204ENST00000513318 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 FRAT2O75474 233 aaPredicted RBP9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 RASGRF1Q13972 1273 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 MYO3BQ8WXR4 1341 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 ZNF541Q9H0D2 1346 aa9.27□□□□□ -0.93
HMGXB3-204ENST00000513318 RAD17O75943 681 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 MX1P20591 662 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 MCAMP43121 646 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 GTF2IP78347 998 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 PLCB2Q00722 1185 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 CXCL9Q07325 125 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 TNIP1Q15025 636 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 TTLL5Q6EMB2 1281 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 GPC2Q8N158 579 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 TBC1D22AQ8WUA7 517 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 MYH1P12882 1939 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 AOX1Q06278 1338 aa9.26□□□□□ -0.93
HMGXB3-204ENST00000513318 MYH8P13535 1937 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 PSMD14O00487 310 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 ERC2O15083 957 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 VIL1P09327 827 aaKnown RBP9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 ATP5JP18859 108 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 CHAF1AQ13111 956 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 ZGPATQ8N5A5 531 aaKnown RBP9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 SPATA5Q8NB90 893 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 ECHDC1Q9NTX5 307 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 SALL1Q9NSC2 1324 aa9.25□□□□□ -0.93
HMGXB3-204ENST00000513318 NAV1Q8NEY1 1877 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 TRPM7Q96QT4 1865 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 GLRX3O76003 335 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 RPS12P25398 132 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 PDE1AP54750 535 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 SCARF1Q14162 830 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 MFSD14BQ5SR56 506 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 RSBN1LQ6PCB5 846 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 AGBL3Q8NEM8 1001 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 OTUD7AQ8TE49 926 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 KCNQ5Q9NR82 932 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 JAG2Q9Y219 1238 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 BAZ2AQ9UIF9 1905 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-204ENST00000513318 IGSF3O75054 1194 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 PDE4AP27815 886 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 TSHZ3Q63HK5 1081 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 HAUS7Q99871 368 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 BOLA2Q9H3K6 86 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 MAST3O60307 1309 aa9.23□□□□□ -0.93
HMGXB3-204ENST00000513318 LAMB1P07942 1786 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 ZAP70P43403 619 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 GMPSP49915 693 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms