RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 FBXO46Q6PJ61 603 aaPredicted RBP31.68■■■□□ 2.66
CLDND1-226ENST00000513287 CLMNQ96JQ2 1002 aa31.68■■■□□ 2.66
CLDND1-226ENST00000513287 SUGT1Q9Y2Z0 365 aa31.68■■■□□ 2.66
CLDND1-226ENST00000513287 TESPA1A2RU30 521 aaPredicted RBP31.67■■■□□ 2.66
CLDND1-226ENST00000513287 CRKP46108 304 aa31.67■■■□□ 2.66
CLDND1-226ENST00000513287 TEPSINQ96N21 525 aa31.67■■■□□ 2.66
CLDND1-226ENST00000513287 TDRD3Q9H7E2 651 aaKnown RBP31.67■■■□□ 2.66
CLDND1-226ENST00000513287 TNNI2P48788 182 aa31.66■■■□□ 2.66
CLDND1-226ENST00000513287 OTUD7BQ6GQQ9 843 aa31.66■■■□□ 2.66
CLDND1-226ENST00000513287 TNRC18O15417 2968 aaPredicted RBP31.65■■■□□ 2.66
CLDND1-226ENST00000513287 TRMT2AQ8IZ69 625 aaKnown RBP31.65■■■□□ 2.66
CLDND1-226ENST00000513287 R3HDMLQ9H3Y0 253 aa31.65■■■□□ 2.66
CLDND1-226ENST00000513287 CT47B1P0C2W7 299 aaPredicted RBP31.64■■■□□ 2.66
CLDND1-226ENST00000513287 FGFR2P21802 821 aa31.64■■■□□ 2.66
CLDND1-226ENST00000513287 FBXO3Q9UK99 471 aa31.63■■■□□ 2.65
CLDND1-226ENST00000513287 IGF2BP3O00425 579 aaKnown RBP eCLIP31.62■■■□□ 2.65
CLDND1-226ENST00000513287 SOX10P56693 466 aa31.62■■■□□ 2.65
CLDND1-226ENST00000513287 PUM3Q15397 648 aaKnown RBP31.62■■■□□ 2.65
CLDND1-226ENST00000513287 PDE4DIPQ5VU43 2346 aa31.62■■■□□ 2.65
CLDND1-226ENST00000513287 FKBP1CQ5VVH2 108 aa31.62■■■□□ 2.65
CLDND1-226ENST00000513287 MAST3O60307 1309 aa31.61■■■□□ 2.65
CLDND1-226ENST00000513287 FRAT2O75474 233 aaPredicted RBP31.61■■■□□ 2.65
CLDND1-226ENST00000513287 IFIT1P09914 478 aaKnown RBP31.61■■■□□ 2.65
CLDND1-226ENST00000513287 GJA5P36382 358 aa31.61■■■□□ 2.65
CLDND1-226ENST00000513287 RFX5P48382 616 aaPredicted RBP31.61■■■□□ 2.65
CLDND1-226ENST00000513287 TEKT1Q969V4 418 aa31.61■■■□□ 2.65
CLDND1-226ENST00000513287 ZDHHC15Q96MV8 337 aa31.61■■■□□ 2.65
CLDND1-226ENST00000513287 EYA2O00167 538 aa31.6■■■□□ 2.65
CLDND1-226ENST00000513287 OTOFQ9HC10 1997 aa31.59■■■□□ 2.65
CLDND1-226ENST00000513287 BCAMP50895 628 aa31.59■■■□□ 2.65
CLDND1-226ENST00000513287 GRIK5Q16478 980 aa31.59■■■□□ 2.65
CLDND1-226ENST00000513287 FAM83AQ86UY5 434 aa31.59■■■□□ 2.65
CLDND1-226ENST00000513287 ZBTB22O15209 634 aa31.58■■■□□ 2.65
CLDND1-226ENST00000513287 SLC34A2O95436 690 aa31.58■■■□□ 2.65
CLDND1-226ENST00000513287 HHIPL2Q6UWX4 724 aa31.58■■■□□ 2.65
CLDND1-226ENST00000513287 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.58■■■□□ 2.65
CLDND1-226ENST00000513287 KLHDC4Q8TBB5 520 aa31.58■■■□□ 2.65
CLDND1-226ENST00000513287 LPIN2Q92539 896 aa31.58■■■□□ 2.65
CLDND1-226ENST00000513287 IQSEC3Q9UPP2 1182 aaPredicted RBP31.58■■■□□ 2.65
CLDND1-226ENST00000513287 TCP10L2B9ZVM9 353 aa31.57■■■□□ 2.64
CLDND1-226ENST00000513287 MAP3K9P80192 1104 aa31.57■■■□□ 2.64
CLDND1-226ENST00000513287 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.57■■■□□ 2.64
CLDND1-226ENST00000513287 MS4A4AQ96JQ5 239 aa31.57■■■□□ 2.64
CLDND1-226ENST00000513287 HDAC5Q9UQL6 1122 aa31.57■■■□□ 2.64
CLDND1-226ENST00000513287 CHAF1AQ13111 956 aaPredicted RBP31.56■■■□□ 2.64
CLDND1-226ENST00000513287 OPTNQ96CV9 577 aa31.56■■■□□ 2.64
CLDND1-226ENST00000513287 HOOK2Q96ED9 719 aa31.56■■■□□ 2.64
CLDND1-226ENST00000513287 PTPN18Q99952 460 aa31.56■■■□□ 2.64
CLDND1-226ENST00000513287 TMEM39BQ9GZU3 492 aa31.56■■■□□ 2.64
CLDND1-226ENST00000513287 WDR66Q8TBY9 1149 aa31.55■■■□□ 2.64
CLDND1-226ENST00000513287 ERO1AQ96HE7 468 aa31.55■■■□□ 2.64
CLDND1-226ENST00000513287 SMC4Q9NTJ3 1288 aa31.55■■■□□ 2.64
CLDND1-226ENST00000513287 CIAO1O76071 339 aa31.54■■■□□ 2.64
CLDND1-226ENST00000513287 SLC5A1P13866 664 aa31.54■■■□□ 2.64
CLDND1-226ENST00000513287 APOBEC3HQ6NTF7 200 aaKnown RBP31.54■■■□□ 2.64
CLDND1-226ENST00000513287 ELP3Q9H9T3 547 aa31.54■■■□□ 2.64
CLDND1-226ENST00000513287 GTF2A2P52657 109 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 OTOP1Q7RTM1 612 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 ATG9AQ7Z3C6 839 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 CDAN1Q8IWY9 1227 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 CDCA7LQ96GN5 454 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 TMOD2Q9NZR1 351 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 CSADQ9Y600 493 aa31.53■■■□□ 2.64
CLDND1-226ENST00000513287 CRHR2Q13324 411 aa31.52■■■□□ 2.64
CLDND1-226ENST00000513287 VGLL4Q14135 290 aa31.52■■■□□ 2.64
CLDND1-226ENST00000513287 INTS3Q68E01 1043 aaKnown RBP31.52■■■□□ 2.64
CLDND1-226ENST00000513287 RPAP1Q9BWH6 1393 aaPredicted RBP31.52■■■□□ 2.64
CLDND1-226ENST00000513287 TRIM17Q9Y577 477 aa31.51■■■□□ 2.63
CLDND1-226ENST00000513287 MYH13Q9UKX3 1938 aa31.5■■■□□ 2.63
CLDND1-226ENST00000513287 UBTFL1P0CB47 393 aaPredicted RBP31.5■■■□□ 2.63
CLDND1-226ENST00000513287 SPDYE5A6NIY4 337 aa31.49■■■□□ 2.63
CLDND1-226ENST00000513287 SP3Q02447 781 aa31.49■■■□□ 2.63
CLDND1-226ENST00000513287 API5Q9BZZ5 524 aaKnown RBP31.49■■■□□ 2.63
CLDND1-226ENST00000513287 ZCCHC17Q9NP64 241 aaKnown RBP31.49■■■□□ 2.63
CLDND1-226ENST00000513287 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.49■■■□□ 2.63
CLDND1-226ENST00000513287 BRI3BPQ8WY22 251 aa31.47■■■□□ 2.63
CLDND1-226ENST00000513287 CEP126Q9P2H0 1117 aa31.47■■■□□ 2.63
CLDND1-226ENST00000513287 PTPN22Q9Y2R2 807 aa31.47■■■□□ 2.63
CLDND1-226ENST00000513287 SALL1Q9NSC2 1324 aa31.47■■■□□ 2.63
CLDND1-226ENST00000513287 SEMA3EO15041 775 aa31.46■■■□□ 2.63
CLDND1-226ENST00000513287 DCAF15Q66K64 600 aa31.46■■■□□ 2.63
CLDND1-226ENST00000513287 ERO1BQ86YB8 467 aa31.46■■■□□ 2.63
CLDND1-226ENST00000513287 GNL3LQ9NVN8 582 aaKnown RBP31.46■■■□□ 2.63
CLDND1-226ENST00000513287 NOB1Q9ULX3 412 aaKnown RBP31.46■■■□□ 2.63
CLDND1-226ENST00000513287 IL15P40933 162 aaPredicted RBP31.45■■■□□ 2.63
CLDND1-226ENST00000513287 CACNB3P54284 484 aa31.45■■■□□ 2.63
CLDND1-226ENST00000513287 ARHGEF6Q15052 776 aa31.45■■■□□ 2.63
CLDND1-226ENST00000513287 ARHGAP45Q92619 1136 aa31.45■■■□□ 2.63
CLDND1-226ENST00000513287 ZFYVE28Q9HCC9 887 aa31.45■■■□□ 2.63
CLDND1-226ENST00000513287 HTTP42858 3142 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 CCL15-CCL14A0A0B4J2E2 113 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 CCL15Q16663 113 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 PRPF38BQ5VTL8 546 aaKnown RBP31.44■■■□□ 2.62
CLDND1-226ENST00000513287 FAM151AQ8WW52 585 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 EFCC1Q9HA90 598 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 COPRSQ9NQ92 184 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 SNCAIPQ9Y6H5 919 aa31.44■■■□□ 2.62
CLDND1-226ENST00000513287 CCER2I3L3R5 266 aa31.43■■■□□ 2.62
CLDND1-226ENST00000513287 ATP2B3Q16720 1220 aa31.43■■■□□ 2.62
CLDND1-226ENST00000513287 CNKSR2Q8WXI2 1034 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms