RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 SLC5A1P13866 664 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 ARID4AP29374 1257 aaPredicted RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 SF3B3Q15393 1217 aaKnown RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 SUSD4Q5VX71 490 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 Q6ZNB5 142 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 FAM227BQ96M60 508 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 DDX60Q8IY21 1712 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 CARMIL3Q8ND23 1372 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 AFF2P51816 1311 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 GOLIM4O00461 696 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 TIMM10P62072 90 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 PTH1RQ03431 593 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 SLC27A3Q5K4L6 730 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 SLC10A5Q5PT55 438 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 APPBP2Q92624 585 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 PDRG1Q9NUG6 133 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 ATP6V1DQ9Y5K8 247 aa10.23□□□□□ -0.77
PPARGC1A-211ENST00000513205 ZMYM6O95789 1325 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 DPYSL4O14531 572 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 KCNQ2O43526 872 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 ZPR1O75312 459 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 PDCP20941 246 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 FGFR2P21802 821 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 DDX46Q7L014 1031 aaKnown RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 PUS3Q9BZE2 481 aaKnown RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 UPF3BQ9BZI7 483 aaKnown RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 CCNL1Q9UK58 526 aaPredicted RBP10.22□□□□□ -0.77
PPARGC1A-211ENST00000513205 MYH14Q7Z406 1995 aaKnown RBP10.21□□□□□ -0.77
PPARGC1A-211ENST00000513205 AK2P54819 239 aa10.21□□□□□ -0.78
PPARGC1A-211ENST00000513205 UBE3CQ15386 1083 aa10.21□□□□□ -0.78
PPARGC1A-211ENST00000513205 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.78
PPARGC1A-211ENST00000513205 FBXL16Q8N461 479 aa10.21□□□□□ -0.78
PPARGC1A-211ENST00000513205 C4BP0C0L5 1744 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 PDS5AQ29RF7 1337 aaKnown RBP10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 RPS6KB1P23443 525 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 UBE4AQ14139 1066 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 TPTE2Q6XPS3 522 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 ZNF589Q86UQ0 364 aaPredicted RBP10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 ANKRD18AQ8IVF6 992 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 NEK1Q96PY6 1258 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 GNL3LQ9NVN8 582 aaKnown RBP10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 BSDC1Q9NW68 430 aaPredicted RBP10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 KIF3AQ9Y496 699 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 SBF2Q86WG5 1849 aa10.2□□□□□ -0.78
PPARGC1A-211ENST00000513205 SEMA3EO15041 775 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 BAG4O95429 457 aaKnown RBP10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 BRD1O95696 1058 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 GTF2E1P29083 439 aaPredicted RBP10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 FKBP4Q02790 459 aaKnown RBP eCLIP10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 CSPP1Q1MSJ5 1256 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 L1TD1Q5T7N2 865 aaKnown RBP10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 CCDC102BQ68D86 513 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 LRCH3Q96II8 777 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 MAST3O60307 1309 aa10.19□□□□□ -0.78
PPARGC1A-211ENST00000513205 GNPATO15228 680 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 TRAK2O60296 914 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 MBD3O95983 291 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 GNAT2P19087 354 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 MAP3K12Q12852 859 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 IMMTQ16891 758 aaKnown RBP10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 KLHL40Q2TBA0 621 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 DDX12PQ92771 950 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 NLRP3Q96P20 1036 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 ANKRD2Q9GZV1 360 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
PPARGC1A-211ENST00000513205 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 ADD2P35612 726 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 MCAMP43121 646 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 ZAP70P43403 619 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 NT5C2P49902 561 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 ZNF772Q68DY9 489 aaPredicted RBP10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 EDC3Q96F86 508 aaKnown RBP10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 LLPHQ9BRT6 129 aaKnown RBP10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 AGXT2Q9BYV1 514 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 KAT6BQ8WYB5 2073 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 ZNF804BA4D1E1 1349 aa10.17□□□□□ -0.78
PPARGC1A-211ENST00000513205 CYP21A2P08686 494 aa10.16□□□□□ -0.78
PPARGC1A-211ENST00000513205 ADORA1P30542 326 aa10.16□□□□□ -0.78
PPARGC1A-211ENST00000513205 RFC4P35249 363 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms