RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PDPK1O15530 556 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 IRS1P35568 1242 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 PICALMQ13492 652 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ZNF354CQ86Y25 554 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ALKBH8Q96BT7 664 aaKnown RBP7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 TRIM56Q9BRZ2 755 aaKnown RBP7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 NBPF3Q9H094 633 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 SMYD2Q9NRG4 433 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 CHIC2Q9UKJ5 165 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 MRC2Q9UBG0 1479 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 PABPN1LA6NDY0 278 aaKnown RBP7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 PMLP29590 882 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ATP13A4Q4VNC1 1196 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 C1orf53Q5VUE5 145 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ZNF449Q6P9G9 518 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 C1orf122Q6ZSJ8 110 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 SULF1Q8IWU6 871 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 APPL2Q8NEU8 664 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 ABCF2Q9UG63 623 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 RABL2BQ9UNT1 228 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 SYNRGQ9UMZ2 1314 aa7.53□□□□□ -1.2
TRAPPC11-209ENST00000512476 CUX2O14529 1486 aa7.52□□□□□ -1.2
TRAPPC11-209ENST00000512476 HMMRO75330 724 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 UBA7P41226 1012 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 BCAMP50895 628 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 IRX3P78415 501 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 DDR2Q16832 855 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 CC2D1BQ5T0F9 858 aaKnown RBP7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 NXNQ6DKJ4 435 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 C1orf228Q6PIY5 440 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 NIM1KQ8IY84 436 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 IFNL2Q8IZJ0 200 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 KCT2Q8NC54 265 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 GOLGA3Q08378 1498 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 TRIM14Q14142 442 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 GRM3Q14832 879 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 SLX1AQ9BQ83 275 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 HERPUD2Q9BSE4 406 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 CAAP1Q9H8G2 361 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 PPT2Q9UMR5 302 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 DGKBQ9Y6T7 804 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 RAD54L2Q9Y4B4 1467 aa7.52□□□□□ -1.21
TRAPPC11-209ENST00000512476 ABCA10Q8WWZ4 1543 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 EYA4O95677 639 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 ZSCAN20P17040 1043 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 BPIFB3P59826 476 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 DDX10Q13206 875 aaKnown RBP7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 AGAP9Q5VTM2 703 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 LRP10Q7Z4F1 713 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 TBC1D31Q96DN5 1066 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 SLC12A5Q9H2X9 1139 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 OSGEPQ9NPF4 335 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 TSR3Q9UJK0 312 aaKnown RBP7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 PPP2R5CQ13362 524 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 PPP2R5BQ15173 497 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 GFOD2Q3B7J2 385 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 IGF2-ASQ6U949 168 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 OTOP3Q7RTS5 596 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 MCM8Q9UJA3 840 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 TMX2Q9Y320 296 aa7.51□□□□□ -1.21
TRAPPC11-209ENST00000512476 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 IFRD2Q12894 506 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 RASGRP2Q7LDG7 609 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 KIAA0825Q8IV33 1275 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 COG1Q8WTW3 980 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 DMTF1Q9Y222 760 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 GABRDO14764 452 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 KCNA2P16389 499 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 HLTFQ14527 1009 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 NBPF8Q3BBV2 869 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 AKAP4Q5JQC9 854 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 WAPLQ7Z5K2 1190 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 UBE2Q1Q7Z7E8 422 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 BORCS6Q96GS4 357 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 SHDQ96IW2 340 aa7.5□□□□□ -1.21
TRAPPC11-209ENST00000512476 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms