RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 LRRC2Q9BYS8 371 aa16.18■□□□□ 0.18
SNCAIP-217ENST00000512385 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
SNCAIP-217ENST00000512385 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 ZKSCAN1P17029 563 aaPredicted RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 CTSWP56202 376 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 TOB2Q14106 344 aaPredicted RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 DDX19AQ9NUU7 478 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 ELP1O95163 1332 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 SLC27A2O14975 620 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 IFIT5Q13325 482 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 UTP14AQ9BVJ6 771 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
SNCAIP-217ENST00000512385 A0A0D9SFI3 127 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 ZPR1O75312 459 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 NTSR2O95665 410 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 TXNRD1Q16881 649 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 BRF1Q92994 677 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 EPC1Q9H2F5 836 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
SNCAIP-217ENST00000512385 CNTNAP4Q9C0A0 1308 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 POLR3GO15318 223 aaPredicted RBP16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 TAF5LO75529 589 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 ADORA1P30542 326 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 RFC4P35249 363 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 PTPN21Q16825 1174 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 SYT10Q6XYQ8 523 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 BECN2A8MW95 431 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 EYA2O00167 538 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 CSF1RP07333 972 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 HNRNPH2P55795 449 aaKnown RBP16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
SNCAIP-217ENST00000512385 SLU7O95391 586 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
SNCAIP-217ENST00000512385 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 CCDC66A2RUB6 948 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 PDE8AO60658 829 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 CLCN6P51797 869 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 NEK11Q8NG66 645 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 SNRKQ9NRH2 765 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 FHOD1Q9Y613 1164 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 COL4A1P02462 1669 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 CNNM1Q9NRU3 951 aa16.13■□□□□ 0.17
SNCAIP-217ENST00000512385 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 CCAR1Q8IX12 1150 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 TAF1P21675 1872 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 PDCP20941 246 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
SNCAIP-217ENST00000512385 H3BQV1 296 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 RESTQ13127 1097 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 ARHGAP29Q52LW3 1261 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 NBPF5PQ86XG9 351 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 SEC62Q99442 399 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 RPS6KB1P23443 525 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 PLA2G4AP47712 749 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 RC3H1Q5TC82 1133 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 KCNB2Q92953 911 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 MRFAP1L1Q96HT8 127 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
SNCAIP-217ENST00000512385 ANKRD18BA2A2Z9 1011 aa16.1■□□□□ 0.17
SNCAIP-217ENST00000512385 EN1Q05925 392 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-217ENST00000512385 NFIXQ14938 502 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms