RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 EVI5O60447 810 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 GTF2IP78347 998 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 LACTBP83111 547 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 UBE2Q1Q7Z7E8 422 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
PDLIM5-217ENST00000512274 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 CCL5P13501 91 aa13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 GJA8P48165 433 aa13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-217ENST00000512274 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 PPP2R3BQ9Y5P8 575 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 AOX1Q06278 1338 aa13.08□□□□□ -0.32
PDLIM5-217ENST00000512274 UNCXA6NJT0 531 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 PDE8AO60658 829 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 GJB1P08034 283 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 GRK4P32298 578 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 GTF2A2P52657 109 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
PDLIM5-217ENST00000512274 MYO1BO43795 1136 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 TLR2O60603 784 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 KLRK1P26718 216 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 CTGFP29279 349 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 MMP14P50281 582 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 FLIIQ13045 1269 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 RASA3Q14644 834 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 PRMT6Q96LA8 375 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 MYD88Q99836 296 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
PDLIM5-217ENST00000512274 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 GNRH1P01148 92 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 HSP90B1P14625 803 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 PSMC4P43686 418 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 PRMT2P55345 433 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 SRRDQ9UH36 339 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 CPA4Q9UI42 421 aa13.05□□□□□ -0.32
PDLIM5-217ENST00000512274 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 OSBPP22059 807 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 BCAMP50895 628 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 TRIM47Q96LD4 638 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 ZMYND8Q9ULU4 1186 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-217ENST00000512274 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 HOXD10P28358 340 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 UBXN2AP68543 259 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 VGLL4Q14135 290 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 GDF15Q99988 308 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 PRDM6Q9NQX0 595 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 MYPNQ86TC9 1320 aa13.03□□□□□ -0.32
PDLIM5-217ENST00000512274 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 SGPL1O95470 568 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 CSADQ9Y600 493 aa13.02□□□□□ -0.33
PDLIM5-217ENST00000512274 MYH3P11055 1940 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 CETPP11597 493 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 SYN1P17600 705 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 BMP8BP34820 402 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms