RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 ADM5C9JUS6 153 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 UQCRFS1P1P0C7P4 283 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 FKBP1AP62942 108 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 SMC1BQ8NDV3 1235 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 ZNF384Q8TF68 577 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 TBC1D22AQ8WUA7 517 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 PIH1D3Q9NQM4 214 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 HDAC9Q9UKV0 1011 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 SEMA3EO15041 775 aa18.79■□□□□ 0.6
SQSTM1-214ENST00000512234 CRKP46108 304 aa18.79■□□□□ 0.6
SQSTM1-214ENST00000512234 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
SQSTM1-214ENST00000512234 USP48Q86UV5 1035 aa18.79■□□□□ 0.6
SQSTM1-214ENST00000512234 BOLA2Q9H3K6 86 aa18.79■□□□□ 0.6
SQSTM1-214ENST00000512234 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 LDHBP07195 334 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 AAMPQ13685 434 aa18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 ZBED3Q96IU2 234 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 DNAJC2Q99543 621 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
SQSTM1-214ENST00000512234 CACNB3P54284 484 aa18.77■□□□□ 0.6
SQSTM1-214ENST00000512234 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
SQSTM1-214ENST00000512234 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.59
SQSTM1-214ENST00000512234 AKAP11Q9UKA4 1901 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 CEP350Q5VT06 3117 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 SPDYE2BA6NHP3 402 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 CHGBP05060 677 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 SPDYE6P0CI01 402 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 MECOMQ03112 1051 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 SLFNL1Q499Z3 407 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 RAI14Q9P0K7 980 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 PGAP2Q9UHJ9 254 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 POLR2AP24928 1970 aaKnown RBP18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 SALL1Q9NSC2 1324 aa18.76■□□□□ 0.59
SQSTM1-214ENST00000512234 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
SQSTM1-214ENST00000512234 GCC1Q96CN9 775 aa18.75■□□□□ 0.59
SQSTM1-214ENST00000512234 ZNF512BQ96KM6 892 aaPredicted RBP18.75■□□□□ 0.59
SQSTM1-214ENST00000512234 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
SQSTM1-214ENST00000512234 LRP2BPQ9P2M1 347 aa18.75■□□□□ 0.59
SQSTM1-214ENST00000512234 GOLIM4O00461 696 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 APOBEC3HQ6NTF7 200 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 DZIP1Q86YF9 867 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 ZNF408Q9H9D4 720 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 SERPINA10Q9UK55 444 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 DAGLAQ9Y4D2 1042 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 MYO5AQ9Y4I1 1855 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
SQSTM1-214ENST00000512234 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 FSTL1Q12841 308 aa18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 ADGRA1Q86SQ6 560 aa18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 ZC3H15Q8WU90 426 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 NSUN4Q96CB9 384 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 ZNF70Q9UC06 446 aaPredicted RBP18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-214ENST00000512234 TCP10L2B9ZVM9 353 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 ATP5JP18859 108 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 MTMR14Q8NCE2 650 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
SQSTM1-214ENST00000512234 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 NUCB1Q02818 461 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 ZDHHC15Q96MV8 337 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 SUGT1Q9Y2Z0 365 aa18.71■□□□□ 0.59
SQSTM1-214ENST00000512234 CST9Q5W186 159 aa18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 CDC42EP5Q6NZY7 148 aa18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 HHIPL2Q6UWX4 724 aa18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 SULF1Q8IWU6 871 aa18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
SQSTM1-214ENST00000512234 ZBTB22O15209 634 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 NEFLP07196 543 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 MX1P20591 662 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 HDLBPQ00341 1268 aaKnown RBP18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 SPDYE2Q495Y8 402 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 HAUS7Q99871 368 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 PAG1Q9NWQ8 432 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 PDE4AP27815 886 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 BTDP43251 543 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 NFIAQ12857 509 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 PRKG1Q13976 671 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 MAGEB6Q8N7X4 407 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 CDCA5Q96FF9 252 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 USP40Q9NVE5 1235 aa18.69■□□□□ 0.58
SQSTM1-214ENST00000512234 MAST3O60307 1309 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 CELF2O95319 508 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 TCP10Q12799 353 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 MOB2Q70IA6 237 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms