RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 PPFIA2O75334 1257 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 KCNG1Q9UIX4 513 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 C6orf229H3BNL8 230 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 STX10O60499 249 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 ATP2A3Q93084 1043 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 ATP2C2O75185 946 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 SMTNP53814 917 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 SMARCC2Q8TAQ2 1214 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 PARP2Q9UGN5 583 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 GUCA1BQ9UMX6 200 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 HEATR3Q7Z4Q2 680 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 NYXQ9GZU5 481 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 MYL5Q02045 173 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 RHPN1Q8TCX5 695 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 CETN3O15182 167 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 PCK1P35558 622 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 NAA25Q14CX7 972 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
TRIO-218ENST00000512070 CRCPO75575 148 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 SDSP20132 328 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 BRF1Q92994 677 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 I3L4J1 428 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
TRIO-218ENST00000512070 PPP2R5BQ15173 497 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 WDR44Q5JSH3 913 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 CCDC122Q5T0U0 273 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 UBLCP1Q8WVY7 318 aaPredicted RBP16.22■□□□□ 0.19
TRIO-218ENST00000512070 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 KCNK9Q9NPC2 374 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.193e-7■■■■■ 65.1
TRIO-218ENST00000512070 PTGS1P23219 599 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 LIN9Q5TKA1 542 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 NAPGQ99747 312 aaPredicted RBP16.22■□□□□ 0.19
TRIO-218ENST00000512070 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 GRM8O00222 908 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
TRIO-218ENST00000512070 PDE1AP54750 535 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 SDCCAG8Q86SQ7 713 aaPredicted RBP16.21■□□□□ 0.19
TRIO-218ENST00000512070 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
TRIO-218ENST00000512070 SH3BP5O60239 455 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 MCUR1Q96AQ8 359 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 HAUS3Q68CZ6 603 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 ABCC5O15440 1437 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 EXOC5O00471 708 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.19
TRIO-218ENST00000512070 PPP2R3AQ06190 1150 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 ATP2B3Q16720 1220 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 MAIP1Q8WWC4 291 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 NOX5Q96PH1 765 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.19
TRIO-218ENST00000512070 ZNF569Q5MCW4 686 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 FCHSD1Q86WN1 690 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 ZMYND15Q9H091 742 aa16.21■□□□□ 0.19
TRIO-218ENST00000512070 PPFIA3O75145 1194 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 CHMP4BP1P59074 171 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 Q6ZUG5 572 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 GRIN2AQ12879 1464 aa16.21■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA6CA6NDK9 693 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 NDUFAB1O14561 156 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA6DP0CG33 693 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 GBP7Q8N8V2 638 aaPredicted RBP16.2■□□□□ 0.18
TRIO-218ENST00000512070 IFT81Q8WYA0 676 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA6AQ9NYA3 693 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 ITIH3Q06033 890 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 CDAN1Q8IWY9 1227 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 CCDC38Q502W7 563 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 E7EVH7 732 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 INPP5BP32019 993 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 CLGNO14967 610 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
TRIO-218ENST00000512070 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 AK9Q5TCS8 1911 aa16.2■□□□□ 0.18
TRIO-218ENST00000512070 BUB1BO60566 1050 aaPredicted RBP16.19■□□□□ 0.18
TRIO-218ENST00000512070 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms