RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 HMG20BQ9P0W2 317 aa19.76■□□□□ 0.75
SIM1-204ENST00000511871 DBNLQ9UJU6 430 aaKnown RBP19.76■□□□□ 0.75
SIM1-204ENST00000511871 SUPT16HQ9Y5B9 1047 aaKnown RBP19.76■□□□□ 0.75
SIM1-204ENST00000511871 PCDHB15Q9Y5E8 787 aa19.76■□□□□ 0.75
SIM1-204ENST00000511871 MAST3O60307 1309 aa19.75■□□□□ 0.75
SIM1-204ENST00000511871 AOX1Q06278 1338 aa19.75■□□□□ 0.75
SIM1-204ENST00000511871 UQCRFS1P1P0C7P4 283 aa19.75■□□□□ 0.75
SIM1-204ENST00000511871 RBM5P52756 815 aaKnown RBP eCLIP19.75■□□□□ 0.75
SIM1-204ENST00000511871 IL1RAPL2Q9NP60 686 aa19.75■□□□□ 0.75
SIM1-204ENST00000511871 TLR7Q9NYK1 1049 aaKnown RBP19.75■□□□□ 0.75
SIM1-204ENST00000511871 CEP350Q5VT06 3117 aa19.74■□□□□ 0.75
SIM1-204ENST00000511871 APBB1O00213 710 aa19.74■□□□□ 0.75
SIM1-204ENST00000511871 CELF2O95319 508 aaKnown RBP19.74■□□□□ 0.75
SIM1-204ENST00000511871 PRDX5P30044 214 aa19.74■□□□□ 0.75
SIM1-204ENST00000511871 CCDC158Q5M9N0 1113 aa19.74■□□□□ 0.75
SIM1-204ENST00000511871 SCAF8Q9UPN6 1271 aaKnown RBP19.74■□□□□ 0.75
SIM1-204ENST00000511871 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
SIM1-204ENST00000511871 MCAMP43121 646 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 TTC39AQ5SRH9 613 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 AACSQ86V21 672 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 ZGPATQ8N5A5 531 aaKnown RBP19.73■□□□□ 0.75
SIM1-204ENST00000511871 SPATA5Q8NB90 893 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 TEKT1Q969V4 418 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 ZNF512BQ96KM6 892 aaPredicted RBP19.73■□□□□ 0.75
SIM1-204ENST00000511871 LDHBP07195 334 aaKnown RBP19.73■□□□□ 0.75
SIM1-204ENST00000511871 PI16Q6UXB8 463 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 APOBEC3FQ8IUX4 373 aaKnown RBP19.73■□□□□ 0.75
SIM1-204ENST00000511871 CDCA5Q96FF9 252 aa19.73■□□□□ 0.75
SIM1-204ENST00000511871 MYO1BO43795 1136 aa19.72■□□□□ 0.75
SIM1-204ENST00000511871 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
SIM1-204ENST00000511871 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
SIM1-204ENST00000511871 ZDHHC15Q96MV8 337 aa19.72■□□□□ 0.75
SIM1-204ENST00000511871 DCTPP1Q9H773 170 aa19.72■□□□□ 0.75
SIM1-204ENST00000511871 ZNF408Q9H9D4 720 aa19.72■□□□□ 0.75
SIM1-204ENST00000511871 CLRN2A0PK11 232 aa19.71■□□□□ 0.75
SIM1-204ENST00000511871 SPDYE2Q495Y8 402 aa19.71■□□□□ 0.75
SIM1-204ENST00000511871 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
SIM1-204ENST00000511871 ABCF2Q9UG63 623 aa19.71■□□□□ 0.75
SIM1-204ENST00000511871 SPTY2D1Q68D10 685 aaPredicted RBP19.7■□□□□ 0.74
SIM1-204ENST00000511871 KLRG1Q96E93 195 aa19.7■□□□□ 0.74
SIM1-204ENST00000511871 ZNF70Q9UC06 446 aaPredicted RBP19.7■□□□□ 0.74
SIM1-204ENST00000511871 MAST2Q6P0Q8 1798 aa19.7■□□□□ 0.74
SIM1-204ENST00000511871 DOCK2Q92608 1830 aa19.7■□□□□ 0.74
SIM1-204ENST00000511871 AAMPQ13685 434 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 DIXDC1Q155Q3 683 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 ABT1Q9ULW3 272 aaKnown RBP19.69■□□□□ 0.74
SIM1-204ENST00000511871 TLL2Q9Y6L7 1015 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 PRAMEF18Q5VWM3 479 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
SIM1-204ENST00000511871 TBC1D9Q6ZT07 1266 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 LRRCC1Q9C099 1032 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 SNRKQ9NRH2 765 aa19.69■□□□□ 0.74
SIM1-204ENST00000511871 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
SIM1-204ENST00000511871 PAPPA2Q9BXP8 1791 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 RASSF10A6NK89 507 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 ERICH6Q7L0X2 663 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 EXOC6Q8TAG9 804 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 DAGLAQ9Y4D2 1042 aa19.68■□□□□ 0.74
SIM1-204ENST00000511871 SAPCD2Q86UD0 394 aa19.67■□□□□ 0.74
SIM1-204ENST00000511871 GBA2Q9HCG7 927 aaPredicted RBP19.67■□□□□ 0.74
SIM1-204ENST00000511871 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
SIM1-204ENST00000511871 IFIT2P09913 472 aaKnown RBP19.66■□□□□ 0.74
SIM1-204ENST00000511871 ZAP70P43403 619 aa19.66■□□□□ 0.74
SIM1-204ENST00000511871 DEFB115Q30KQ5 88 aa19.66■□□□□ 0.74
SIM1-204ENST00000511871 DZIP1Q86YF9 867 aaKnown RBP19.66■□□□□ 0.74
SIM1-204ENST00000511871 PPP2R3BQ9Y5P8 575 aa19.66■□□□□ 0.74
SIM1-204ENST00000511871 GAKO14976 1311 aa19.66■□□□□ 0.74
SIM1-204ENST00000511871 AK9Q5TCS8 1911 aa19.66■□□□□ 0.74
SIM1-204ENST00000511871 SMARCA5O60264 1052 aaPredicted RBP19.65■□□□□ 0.74
SIM1-204ENST00000511871 MECOMQ03112 1051 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 C2orf69Q8N8R5 385 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 ZNF384Q8TF68 577 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
SIM1-204ENST00000511871 TNFAIP1Q13829 316 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 RASA3Q14644 834 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
SIM1-204ENST00000511871 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
SIM1-204ENST00000511871 NSUN4Q96CB9 384 aaKnown RBP19.64■□□□□ 0.73
SIM1-204ENST00000511871 HHIPL1Q96JK4 782 aa19.64■□□□□ 0.73
SIM1-204ENST00000511871 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
SIM1-204ENST00000511871 LRP2BPQ9P2M1 347 aa19.64■□□□□ 0.73
SIM1-204ENST00000511871 CDK5RAP2Q96SN8 1893 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 TCP10L2B9ZVM9 353 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 VEGFBP49765 207 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 CACNB3P54284 484 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 FKBP1BP68106 108 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 HDAC1Q13547 482 aaPredicted RBP19.63■□□□□ 0.73
SIM1-204ENST00000511871 FKBP1CQ5VVH2 108 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 CDC42EP5Q6NZY7 148 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.63■□□□□ 0.73
SIM1-204ENST00000511871 PIH1D3Q9NQM4 214 aaKnown RBP19.63■□□□□ 0.73
SIM1-204ENST00000511871 MROH7-TTC4A0A0A0MT08 1334 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 SSC5DA1L4H1 1573 aa19.63■□□□□ 0.73
SIM1-204ENST00000511871 NF2P35240 595 aa19.62■□□□□ 0.73
SIM1-204ENST00000511871 TNNI2P48788 182 aa19.62■□□□□ 0.73
SIM1-204ENST00000511871 HUNKP57058 714 aa19.62■□□□□ 0.73
SIM1-204ENST00000511871 JMYQ8N9B5 988 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms