RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 IGSF5Q9NSI5 407 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 SOX13Q9UN79 622 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 PIP4K2BP78356 416 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 HDLBPQ00341 1268 aaKnown RBP6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 USP48Q86UV5 1035 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 OSGEPQ9NPF4 335 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
CALCOCO2-220ENST00000511816 CYP11A1P05108 521 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 ZC3H6P61129 1189 aaKnown RBP6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 AP3B2Q13367 1082 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 LRRC14Q15048 493 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 GRIK4Q16099 956 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 IGF2-ASQ6U949 168 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 ZNF654Q8IZM8 581 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 KLHL23Q8NBE8 558 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 TGIF2Q9GZN2 237 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 CCSER2Q9H7U1 834 aa6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 SH2B1Q9NRF2 756 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-220ENST00000511816 C1QTNF9BB2RNN3 333 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 B3GALT4O96024 378 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 CDC25BP30305 580 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 GATA4P43694 442 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 LDLRAD1Q5T700 205 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 VN1R5Q7Z5H4 357 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 SLC7A3Q8WY07 619 aa6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 LENG1Q96BZ8 264 aaPredicted RBP6.27□□□□□ -1.41
CALCOCO2-220ENST00000511816 EPHA1P21709 976 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 NME2P22392 152 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 RPS26P62854 115 aaKnown RBP6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 C9orf131Q5VYM1 1079 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 SCARA3Q6AZY7 606 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 MRPL18Q9H0U6 180 aaKnown RBP6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 CYP8B1Q9UNU6 501 aa6.26□□□□□ -1.41
CALCOCO2-220ENST00000511816 SOX1O00570 391 aaPredicted RBP6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 FSCN2O14926 492 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 FBXO24O75426 580 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 CHRNA4P43681 627 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 BAG6P46379 1132 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 ZNF157P51786 506 aaPredicted RBP6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 GSTM4Q03013 218 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 TXNDC11Q6PKC3 985 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 METTL16Q86W50 562 aaKnown RBP6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 VPS37DQ86XT2 251 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 SPATA32Q96LK8 384 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 C8orf37Q96NL8 207 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 SPOCK3Q9BQ16 436 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 CBX8Q9HC52 389 aa6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.25□□□□□ -1.41
CALCOCO2-220ENST00000511816 ENC1O14682 589 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 ARNTP27540 789 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 CD68P34810 354 aaPredicted RBP6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 LIG3P49916 1009 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 FAAP100Q0VG06 881 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 SETDB1Q15047 1291 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 ERMP1Q7Z2K6 904 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 TXNRD3Q86VQ6 643 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 CORO1BQ9BR76 489 aa6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
CALCOCO2-220ENST00000511816 DLL1O00548 723 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 CELA3AP09093 270 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 CARD10Q9BWT7 1032 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 MIR1-1HGQ9H1L0 117 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 KBTBD4Q9NVX7 518 aa6.23□□□□□ -1.41
CALCOCO2-220ENST00000511816 MINDY4BA8MYZ0 360 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 DEAF1O75398 565 aaPredicted RBP6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 SELPP16109 830 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 EIF4A3P38919 411 aaKnown RBP6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 ADGRE1Q14246 886 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 POU4F3Q15319 338 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 AGMOQ6ZNB7 445 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 CCDC84Q86UT8 332 aaPredicted RBP6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 SPON2Q9BUD6 331 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 CEP41Q9BYV8 373 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 AKTIPQ9H8T0 292 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 CAPN10Q9HC96 672 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 INPP5FQ9Y2H2 1132 aa6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 SUPT16HQ9Y5B9 1047 aaKnown RBP6.22□□□□□ -1.41
CALCOCO2-220ENST00000511816 ROBO2Q9HCK4 1378 aa6.21□□□□□ -1.41
CALCOCO2-220ENST00000511816 GSTP1P09211 210 aaKnown RBP6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 LMNB2Q03252 620 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms