RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 USP17L22D6RA61 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L17D6RBQ6 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L19D6RCP7 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L20D6RJB6 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 DDNO94850 711 aaPredicted RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L24Q0WX57 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 PTK7Q13308 1070 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 OXLD1Q5BKU9 147 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 OLFM4Q6UX06 510 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 MCM10Q7L590 875 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 ST5P78524 1137 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 DCTN1Q14203 1278 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 STYK1Q6J9G0 422 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 NBPF10Q6P3W6 841 aaKnown RBP8.87□□□□□ -0.99
COPS4-209ENST00000511653 TNS4Q8IZW8 715 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 NBPF15Q8N660 670 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 PDZRN3Q9UPQ7 1066 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
COPS4-209ENST00000511653 SNED1Q8TER0 1413 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 NPHP1O15259 732 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 DKK1O94907 266 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 RASA1P20936 1047 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 GGCXP38435 758 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 MASTLQ96GX5 879 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
COPS4-209ENST00000511653 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 COL4A5P29400 1685 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 LTBP1Q14766 1721 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 ZNF541Q9H0D2 1346 aa8.86□□□□□ -0.99
COPS4-209ENST00000511653 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 RPIAP49247 311 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 WNT7BP56706 349 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 NBPF5PQ86XG9 351 aaPredicted RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 USTQ9Y2C2 406 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 ABCC12Q96J65 1359 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 FAM177BA6PVY3 158 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 SCTRP47872 440 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 EML3Q32P44 896 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 MAP7D1Q3KQU3 841 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 SLC51AQ86UW1 340 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
COPS4-209ENST00000511653 PCDHB11Q9Y5F2 797 aa8.85□□□□□ -0.99
COPS4-209ENST00000511653 PASKQ96RG2 1323 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 KLRG2A4D1S0 409 aaPredicted RBP8.84□□□□□ -0.99
COPS4-209ENST00000511653 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 SNRPA1P09661 255 aaKnown RBP8.84□□□□□ -0.99
COPS4-209ENST00000511653 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
COPS4-209ENST00000511653 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
COPS4-209ENST00000511653 PPP2R1AP30153 589 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
COPS4-209ENST00000511653 ELOAQ14241 798 aaKnown RBP8.84□□□□□ -0.99
COPS4-209ENST00000511653 HLFQ16534 295 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 CCDC93Q567U6 631 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 CLEC4GQ6UXB4 293 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
COPS4-209ENST00000511653 NIP7Q9Y221 180 aaKnown RBP eCLIP8.84□□□□□ -0.99
COPS4-209ENST00000511653 LAMB2P55268 1798 aa8.83□□□□□ -1
COPS4-209ENST00000511653 CNTNAP1P78357 1384 aa8.83□□□□□ -1
COPS4-209ENST00000511653 SIAH2O43255 324 aa8.83□□□□□ -1
COPS4-209ENST00000511653 NPR1P16066 1061 aa8.83□□□□□ -1
COPS4-209ENST00000511653 GRM5P41594 1212 aa8.83□□□□□ -1
COPS4-209ENST00000511653 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
COPS4-209ENST00000511653 ARID5BQ14865 1188 aa8.83□□□□□ -1
COPS4-209ENST00000511653 SOGA3Q5TF21 947 aa8.83□□□□□ -1
COPS4-209ENST00000511653 CFAP53Q96M91 514 aa8.83□□□□□ -1
COPS4-209ENST00000511653 TAF1DQ9H5J8 278 aaPredicted RBP8.83□□□□□ -1
COPS4-209ENST00000511653 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
COPS4-209ENST00000511653 MIS18AQ9NYP9 233 aa8.83□□□□□ -1
COPS4-209ENST00000511653 ZNF652Q9Y2D9 606 aa8.83□□□□□ -1
COPS4-209ENST00000511653 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
COPS4-209ENST00000511653 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
COPS4-209ENST00000511653 LGR5O75473 907 aa8.82□□□□□ -1
COPS4-209ENST00000511653 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
COPS4-209ENST00000511653 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
COPS4-209ENST00000511653 VASH1Q7L8A9 365 aaPredicted RBP8.82□□□□□ -1
COPS4-209ENST00000511653 LDHDQ86WU2 507 aa8.82□□□□□ -1
COPS4-209ENST00000511653 RTF1Q92541 710 aaKnown RBP8.82□□□□□ -1
COPS4-209ENST00000511653 ZNF592Q92610 1267 aa8.82□□□□□ -1
COPS4-209ENST00000511653 TRPM7Q96QT4 1865 aa8.82□□□□□ -1
COPS4-209ENST00000511653 ANKRD36CQ5JPF3 1778 aa8.82□□□□□ -1
COPS4-209ENST00000511653 TAF1P21675 1872 aa8.81□□□□□ -1
COPS4-209ENST00000511653 ATP5J2-PTCD1G3V325 749 aa8.81□□□□□ -1
COPS4-209ENST00000511653 FOXN1O15353 648 aa8.81□□□□□ -1
COPS4-209ENST00000511653 DPYDQ12882 1025 aa8.81□□□□□ -1
COPS4-209ENST00000511653 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
COPS4-209ENST00000511653 NUDCQ9Y266 331 aa8.81□□□□□ -1
COPS4-209ENST00000511653 RNF123Q5XPI4 1314 aa8.81□□□□□ -1
COPS4-209ENST00000511653 IQCA1LA6NCM1 817 aa8.81□□□□□ -1
COPS4-209ENST00000511653 SCNN1AP37088 669 aa8.81□□□□□ -1
COPS4-209ENST00000511653 GTF2IP78347 998 aa8.81□□□□□ -1
COPS4-209ENST00000511653 EAPPQ56P03 285 aaPredicted RBP8.81□□□□□ -1
COPS4-209ENST00000511653 TPTE2Q6XPS3 522 aa8.81□□□□□ -1
COPS4-209ENST00000511653 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms