RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 SLC7A3Q8WY07 619 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 RAXQ9Y2V3 346 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 OAS3Q9Y6K5 1087 aaKnown RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 ADAMTS4O75173 837 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 TRPA1O75762 1119 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 CYP11A1P05108 521 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 ITPKAP23677 461 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 GSTT1P30711 240 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 ADAMTSL4Q6UY14 1074 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 SLC51AQ86UW1 340 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 TCF12Q99081 682 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 BCO2Q9BYV7 579 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 CEP41Q9BYV8 373 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 KCNK4Q9NYG8 393 aa7.12□□□□□ -1.27
HMGB3P13-201ENST00000511263 IGLV1-40P01703 118 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 ESRRAP11474 423 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 XPCQ01831 940 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 GRM2Q14416 872 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 DUOXA2Q1HG44 320 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 ARMC10Q8N2F6 343 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
HMGB3P13-201ENST00000511263 KIAA1324LA8MWY0 1029 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 TM4SF5O14894 197 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 PAX4O43316 350 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 P4HBP07237 508 aaKnown RBP7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 ZNF326Q5BKZ1 582 aaKnown RBP7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 CEP44Q9C0F1 390 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 STOML1Q9UBI4 398 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P13-201ENST00000511263 SOX1O00570 391 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 EIF4BP23588 611 aaKnown RBP7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 GNA15P30679 374 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 GRIA4P48058 902 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 IRAK1P51617 712 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 FCGRTP55899 365 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 GSTM4Q03013 218 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 AP3B2Q13367 1082 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 DNAJC14Q6Y2X3 702 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 ZDHHC13Q8IUH4 622 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 CARD10Q9BWT7 1032 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 RNF208Q9H0X6 261 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 ABCB6Q9NP58 842 aa7.09□□□□□ -1.27
HMGB3P13-201ENST00000511263 COBLO75128 1261 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 B3GALT4O96024 378 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 TAL1P17542 331 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 GP2P55259 537 aaKnown RBP7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 DIEXFQ68CQ4 756 aaKnown RBP7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 ACAD11Q709F0 780 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 KLHDC7BQ96G42 594 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 FMNL2Q96PY5 1086 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 CYP4F12Q9HCS2 524 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 PODXL2Q9NZ53 605 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 AKAP2Q9Y2D5 859 aa7.08□□□□□ -1.28
HMGB3P13-201ENST00000511263 METTL12A8MUP2 240 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 DHX15O43143 795 aaKnown RBP7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 SART1O43290 800 aaKnown RBP7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 NPAS4Q8IUM7 802 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 TMEM39AQ9NV64 488 aa7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 ARID1BQ8NFD5 2236 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P13-201ENST00000511263 HMX2A2RU54 273 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 GSC2O15499 205 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 DDX3YO15523 660 aaKnown RBP7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 NLRP12P59046 1061 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 NFIAQ12857 509 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 PSMD2Q13200 908 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 UTP4Q969X6 686 aaKnown RBP7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 FAM46AQ96IP4 442 aaKnown RBP7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 RUSC1Q9BVN2 902 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 USP26Q9BXU7 913 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 C7orf69Q9H7B7 122 aa7.06□□□□□ -1.28
HMGB3P13-201ENST00000511263 MEGF11A6BM72 1044 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 SPINK2P20155 84 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 POU4F3Q15319 338 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 EXOSC6Q5RKV6 272 aaKnown RBP7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms