RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 FAM184AQ8NB25 1140 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 RBM46Q8TBY0 533 aaKnown RBP8.87□□□□□ -0.99
CAST-228ENST00000509903 GPR108Q9NPR9 543 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 SH3TC1Q8TE82 1336 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 EYA2O00167 538 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 KRT85P78386 507 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 FGD1P98174 961 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
CAST-228ENST00000509903 SEC62Q99442 399 aaKnown RBP8.86□□□□□ -0.99
CAST-228ENST00000509903 ATP9BO43861 1147 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 CHGBP05060 677 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 PRSS12P56730 875 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 TIMM10P62072 90 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 NR6A1Q15406 480 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
CAST-228ENST00000509903 CDC37L1Q7L3B6 337 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 FERMT3Q86UX7 667 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
CAST-228ENST00000509903 TJP1Q07157 1748 aa8.86□□□□□ -0.99
CAST-228ENST00000509903 PALLDQ8WX93 1383 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 PAPPAQ13219 1627 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 TNS2Q63HR2 1409 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 A0A1B0GUL7 405 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 CIAO1O76071 339 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 CYP21A2P08686 494 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 IFIT1P09914 478 aaKnown RBP8.85□□□□□ -0.99
CAST-228ENST00000509903 CCDC57Q2TAC2 916 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 LRRC24Q50LG9 513 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
CAST-228ENST00000509903 HELLSQ9NRZ9 838 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 ANKRD33BA6NCL7 494 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
CAST-228ENST00000509903 GORABQ5T7V8 394 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 Q6ZUG5 572 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 TICAM2Q86XR7 235 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 GTF3C6Q969F1 213 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 ADAM33Q9BZ11 813 aa8.85□□□□□ -0.99
CAST-228ENST00000509903 NOL7Q9UMY1 257 aaKnown RBP8.85□□□□□ -0.99
CAST-228ENST00000509903 SEMA3FQ13275 785 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 TCIRG1Q13488 830 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 UVSSAQ2YD98 709 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 ISCA1Q9BUE6 129 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 TEX13AQ9BXU3 409 aaPredicted RBP8.84□□□□□ -0.99
CAST-228ENST00000509903 ZNF335Q9H4Z2 1342 aaPredicted RBP8.84□□□□□ -0.99
CAST-228ENST00000509903 ABCA3Q99758 1704 aa8.84□□□□□ -0.99
CAST-228ENST00000509903 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
CAST-228ENST00000509903 GOLGA6L4A6NEF3 574 aa8.83□□□□□ -1
CAST-228ENST00000509903 STARD3NLO95772 234 aa8.83□□□□□ -1
CAST-228ENST00000509903 LRRFIP1Q32MZ4 808 aaKnown RBP8.83□□□□□ -1
CAST-228ENST00000509903 CCDC158Q5M9N0 1113 aa8.83□□□□□ -1
CAST-228ENST00000509903 BRF1Q92994 677 aa8.83□□□□□ -1
CAST-228ENST00000509903 DSCC1Q9BVC3 393 aa8.83□□□□□ -1
CAST-228ENST00000509903 PUS3Q9BZE2 481 aaKnown RBP8.83□□□□□ -1
CAST-228ENST00000509903 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
CAST-228ENST00000509903 STRCQ7RTU9 1775 aa8.83□□□□□ -1
CAST-228ENST00000509903 H3BQV1 296 aa8.83□□□□□ -1
CAST-228ENST00000509903 KDM4AO75164 1064 aa8.83□□□□□ -1
CAST-228ENST00000509903 HCLS1P14317 486 aaPredicted RBP8.83□□□□□ -1
CAST-228ENST00000509903 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
CAST-228ENST00000509903 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
CAST-228ENST00000509903 ZMYM1Q5SVZ6 1142 aa8.83□□□□□ -1
CAST-228ENST00000509903 IFFO2Q5TF58 517 aa8.83□□□□□ -1
CAST-228ENST00000509903 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
CAST-228ENST00000509903 TTC6Q86TZ1 520 aa8.83□□□□□ -1
CAST-228ENST00000509903 DNAJC10Q8IXB1 793 aa8.83□□□□□ -1
CAST-228ENST00000509903 SYMPKQ92797 1274 aaKnown RBP8.83□□□□□ -1
CAST-228ENST00000509903 LRRC2Q9BYS8 371 aa8.83□□□□□ -1
CAST-228ENST00000509903 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
CAST-228ENST00000509903 ZKSCAN5Q9Y2L8 839 aa8.83□□□□□ -1
CAST-228ENST00000509903 ELP1O95163 1332 aa8.83□□□□□ -1
CAST-228ENST00000509903 RNF113AO15541 343 aaKnown RBP8.82□□□□□ -1
CAST-228ENST00000509903 HOXA2O43364 376 aa8.82□□□□□ -1
CAST-228ENST00000509903 JAK2O60674 1132 aa8.82□□□□□ -1
CAST-228ENST00000509903 FDX1P10109 184 aa8.82□□□□□ -1
CAST-228ENST00000509903 MCM5P33992 734 aa8.82□□□□□ -1
CAST-228ENST00000509903 FKBP4Q02790 459 aaKnown RBP eCLIP8.82□□□□□ -1
CAST-228ENST00000509903 IFIT5Q13325 482 aaKnown RBP8.82□□□□□ -1
CAST-228ENST00000509903 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
CAST-228ENST00000509903 FAM173BQ6P4H8 233 aa8.82□□□□□ -1
CAST-228ENST00000509903 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
CAST-228ENST00000509903 DHX32Q7L7V1 743 aaKnown RBP8.82□□□□□ -1
CAST-228ENST00000509903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.82□□□□□ -1
CAST-228ENST00000509903 SPATA32Q96LK8 384 aa8.82□□□□□ -1
CAST-228ENST00000509903 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
CAST-228ENST00000509903 TSKSQ9UJT2 592 aa8.82□□□□□ -1
CAST-228ENST00000509903 ASAP1Q9ULH1 1129 aa8.82□□□□□ -1
CAST-228ENST00000509903 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
CAST-228ENST00000509903 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
CAST-228ENST00000509903 SPEF2Q9C093 1822 aa8.82□□□□□ -1
CAST-228ENST00000509903 MAST3O60307 1309 aa8.82□□□□□ -1
CAST-228ENST00000509903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms