RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 FBXL6Q8N531 539 aa4.16□□□□□ -1.74
SMN2-209ENST00000509805 GIMAP7Q8NHV1 300 aa4.16□□□□□ -1.74
SMN2-209ENST00000509805 CCDC74AQ96AQ1 378 aa4.16□□□□□ -1.74
SMN2-209ENST00000509805 CITED4Q96RK1 184 aa4.16□□□□□ -1.74
SMN2-209ENST00000509805 SSBP4Q9BWG4 385 aaPredicted RBP4.16□□□□□ -1.74
SMN2-209ENST00000509805 CLEC4MQ9H2X3 399 aaPredicted RBP4.16□□□□□ -1.74
SMN2-209ENST00000509805 HMX2A2RU54 273 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 EIF4EBP3O60516 100 aaPredicted RBP4.15□□□□□ -1.75
SMN2-209ENST00000509805 MAOBP27338 520 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 MAPK8P45983 427 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 GRIA4P48058 902 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 PREPP48147 710 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 PLCB3Q01970 1234 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 POU4F3Q15319 338 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 UVSSAQ2YD98 709 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
SMN2-209ENST00000509805 DTHD1Q6ZMT9 781 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 DYMQ7RTS9 669 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 MYRFLQ96LU7 910 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 CSRNP1Q96S65 589 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 YIPF2Q9BWQ6 316 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 ZC3H12CQ9C0D7 883 aaKnown RBP4.15□□□□□ -1.75
SMN2-209ENST00000509805 BHLHE41Q9C0J9 482 aaPredicted RBP4.15□□□□□ -1.75
SMN2-209ENST00000509805 ZFYVE1Q9HBF4 777 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 ATG3Q9NT62 314 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 GPN3Q9UHW5 284 aaPredicted RBP4.15□□□□□ -1.75
SMN2-209ENST00000509805 DCTN4Q9UJW0 460 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 AP4E1Q9UPM8 1137 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 IVNS1ABPQ9Y6Y0 642 aa4.15□□□□□ -1.75
SMN2-209ENST00000509805 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 IGLV1-40P01703 118 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 DRD2P14416 443 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 RAB6AP20340 208 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 MAP4P27816 1152 aaKnown RBP4.14□□□□□ -1.75
SMN2-209ENST00000509805 GRIK1P39086 918 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 FCGRTP55899 365 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 HNRNPUQ00839 825 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMN2-209ENST00000509805 EXOSC6Q5RKV6 272 aaKnown RBP4.14□□□□□ -1.75
SMN2-209ENST00000509805 AEBP1Q8IUX7 1158 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 CCNJLQ8IV13 435 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 ZSCAN29Q8IWY8 852 aaPredicted RBP4.14□□□□□ -1.75
SMN2-209ENST00000509805 FAM20CQ8IXL6 584 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 EPS8L3Q8TE67 593 aaKnown RBP4.14□□□□□ -1.75
SMN2-209ENST00000509805 DNAJC25Q9H1X3 360 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 C7orf69Q9H7B7 122 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 AKAP2Q9Y2D5 859 aa4.14□□□□□ -1.75
SMN2-209ENST00000509805 LOC100289279A0A1B0GTE1 492 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 WDR64B1ANS9 1081 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 GPR182O15218 404 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 ATP2B2Q01814 1243 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 NFIAQ12857 509 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 SGO2Q562F6 1265 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 PAOXQ6QHF9 649 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 TMC7Q7Z402 723 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 CLEC10AQ8IUN9 316 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 ARMC10Q8N2F6 343 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 FBLIM1Q8WUP2 373 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 FAM46AQ96IP4 442 aaKnown RBP4.13□□□□□ -1.75
SMN2-209ENST00000509805 MFSD14AQ96MC6 490 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 SOX17Q9H6I2 414 aaPredicted RBP4.13□□□□□ -1.75
SMN2-209ENST00000509805 LGR6Q9HBX8 967 aa4.13□□□□□ -1.75
SMN2-209ENST00000509805 TMEM238LA0A1B0GVL6 79 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 FAM95CA0A1B0GW59 222 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 PPP2R3AQ06190 1150 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 ZNF423Q2M1K9 1284 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 KIAA0319Q5VV43 1072 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 RNF43Q68DV7 783 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 Q6ZS46 218 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.12□□□□□ -1.75
SMN2-209ENST00000509805 KCNB2Q92953 911 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 FAM129BQ96TA1 746 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 TCF12Q99081 682 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 FAM83CQ9BQN1 747 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 DBNDD2Q9BQY9 259 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 OSBPL1AQ9BXW6 950 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 RBCK1Q9BYM8 510 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 PIDD1Q9HB75 910 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 CBX8Q9HC52 389 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 SSU72Q9NP77 194 aaKnown RBP4.12□□□□□ -1.75
SMN2-209ENST00000509805 PICK1Q9NRD5 415 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
SMN2-209ENST00000509805 MEGF11A6BM72 1044 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 RNGTTO60942 597 aaKnown RBP4.11□□□□□ -1.75
SMN2-209ENST00000509805 TGFB1P01137 390 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 PDIA4P13667 645 aaKnown RBP4.11□□□□□ -1.75
SMN2-209ENST00000509805 ASPAP45381 313 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 SOX4Q06945 474 aaPredicted RBP4.11□□□□□ -1.75
SMN2-209ENST00000509805 KCNA1Q09470 495 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 AP3B2Q13367 1082 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 GRM2Q14416 872 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 ECM1Q16610 540 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMN2-209ENST00000509805 PI16Q6UXB8 463 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 SLC51AQ86UW1 340 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 SHKBP1Q8TBC3 707 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 ACSBG1Q96GR2 724 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 TBC1D32Q96NH3 1257 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 TMPRSS13Q9BYE2 586 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms