RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCSER1-208ENST00000509109 USPL1Q5W0Q7 1092 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 ZNF790Q6PG37 636 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 RTF1Q92541 710 aaKnown RBP9.87□□□□□ -0.83
CCSER1-208ENST00000509109 FMNL2Q96PY5 1086 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 PIM2Q9P1W9 311 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 ZBTB1Q9Y2K1 713 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 POLRMTO00411 1230 aaKnown RBP9.86□□□□□ -0.83
CCSER1-208ENST00000509109 DPEP1P16444 411 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 DDR1Q08345 913 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 DALRD3Q5D0E6 543 aaKnown RBP9.86□□□□□ -0.83
CCSER1-208ENST00000509109 LYSMD3Q7Z3D4 306 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 CYP2U1Q7Z449 544 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 RAB6BQ9NRW1 208 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
CCSER1-208ENST00000509109 BTBD11A6QL63 1104 aa9.85□□□□□ -0.83
CCSER1-208ENST00000509109 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
CCSER1-208ENST00000509109 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
CCSER1-208ENST00000509109 SLFNL1Q499Z3 407 aa9.85□□□□□ -0.83
CCSER1-208ENST00000509109 ARHGAP27Q6ZUM4 889 aa9.85□□□□□ -0.83
CCSER1-208ENST00000509109 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
CCSER1-208ENST00000509109 IL17REQ8NFR9 667 aa9.85□□□□□ -0.83
CCSER1-208ENST00000509109 ZNF526Q8TF50 670 aaPredicted RBP9.85□□□□□ -0.83
CCSER1-208ENST00000509109 POM121Q96HA1 1249 aa9.85□□□□□ -0.83
CCSER1-208ENST00000509109 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
CCSER1-208ENST00000509109 TNRC6CQ9HCJ0 1690 aaKnown RBP9.84□□□□□ -0.83
CCSER1-208ENST00000509109 CDC14CA4D256 554 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 TRAK2O60296 914 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 TM4SF1P30408 202 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 IL6STP40189 918 aaPredicted RBP9.84□□□□□ -0.83
CCSER1-208ENST00000509109 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
CCSER1-208ENST00000509109 NFIXQ14938 502 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 RNF135Q8IUD6 432 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 NLRP3Q96P20 1036 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
CCSER1-208ENST00000509109 HTATSF1O43719 755 aaKnown RBP9.83□□□□□ -0.84
CCSER1-208ENST00000509109 ITGA6P23229 1130 aa9.83□□□□□ -0.84
CCSER1-208ENST00000509109 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
CCSER1-208ENST00000509109 PHTF2Q8N3S3 785 aa9.83□□□□□ -0.84
CCSER1-208ENST00000509109 PHACTR3Q96KR7 559 aa9.83□□□□□ -0.84
CCSER1-208ENST00000509109 PNNQ9H307 717 aaKnown RBP9.83□□□□□ -0.84
CCSER1-208ENST00000509109 DOLKQ9UPQ8 538 aa9.83□□□□□ -0.84
CCSER1-208ENST00000509109 NPHP1O15259 732 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 MYCP01106 439 aaPredicted RBP9.82□□□□□ -0.84
CCSER1-208ENST00000509109 SERPINB2P05120 415 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 KCNA3P22001 575 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
CCSER1-208ENST00000509109 OXLD1Q5BKU9 147 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 VWA5B2Q8N398 1253 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 ZSCAN1Q8NBB4 408 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 ZNF652Q9Y2D9 606 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 KDM3BQ7LBC6 1761 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 SBF1O95248 1867 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 TIAM2Q8IVF5 1701 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
CCSER1-208ENST00000509109 ANKRD31Q8N7Z5 1873 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 ARFGEF2Q9Y6D5 1785 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 H0YIN7 160 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 CHRNA5P30532 468 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 SEMA3FQ13275 785 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 CLN3Q13286 438 aa9.81□□□□□ -0.84
CCSER1-208ENST00000509109 COL11A2P13942 1736 aaPredicted RBP9.81□□□□□ -0.84
CCSER1-208ENST00000509109 STAU1O95793 577 aaKnown RBP9.8□□□□□ -0.84
CCSER1-208ENST00000509109 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
CCSER1-208ENST00000509109 PDE6BP35913 854 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 POU4F2Q12837 409 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 MCM10Q7L590 875 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 TTLL6Q8N841 843 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
CCSER1-208ENST00000509109 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
CCSER1-208ENST00000509109 CACNA1SQ13698 1873 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 HSPA6P17066 643 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 GPC1P35052 558 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 ST5P78524 1137 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 C16orf71Q8IYS4 520 aaPredicted RBP9.79□□□□□ -0.84
CCSER1-208ENST00000509109 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 CNTNAP3BQ96NU0 1288 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 BRIP1Q9BX63 1249 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 CNTNAP3Q9BZ76 1288 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
CCSER1-208ENST00000509109 RNF181Q9P0P0 153 aa9.79□□□□□ -0.84
CCSER1-208ENST00000509109 TOMM70O94826 608 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 GNRH1P01148 92 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 IL2RAP01589 272 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 KRT76Q01546 638 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 RALBP1Q15311 655 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
CCSER1-208ENST00000509109 TBC1D9BQ66K14 1250 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms