RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC02171-201ENST00000508619 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
LINC02171-201ENST00000508619 FKBP1CQ5VVH2 108 aa16.8■□□□□ 0.28
LINC02171-201ENST00000508619 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
LINC02171-201ENST00000508619 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
LINC02171-201ENST00000508619 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
LINC02171-201ENST00000508619 ZBED9Q6R2W3 1325 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 CLRN2A0PK11 232 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
LINC02171-201ENST00000508619 RASA3Q14644 834 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
LINC02171-201ENST00000508619 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 GNL3LQ9NVN8 582 aaKnown RBP16.79■□□□□ 0.28
LINC02171-201ENST00000508619 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
LINC02171-201ENST00000508619 ANGEL1Q9UNK9 670 aaKnown RBP16.79■□□□□ 0.28
LINC02171-201ENST00000508619 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 AOX1Q06278 1338 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 PDS5AQ29RF7 1337 aaKnown RBP16.78■□□□□ 0.28
LINC02171-201ENST00000508619 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 BCAR3O75815 825 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
LINC02171-201ENST00000508619 TNNI2P48788 182 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
LINC02171-201ENST00000508619 IQSEC3Q9UPP2 1182 aaPredicted RBP16.78■□□□□ 0.28
LINC02171-201ENST00000508619 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 GNAI2P04899 355 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.28
LINC02171-201ENST00000508619 INHBEP58166 350 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 GRIK5Q16478 980 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 SPRYD7Q5W111 196 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 ABHD8Q96I13 439 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 TEPSINQ96N21 525 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 SIL1Q9H173 461 aa16.77■□□□□ 0.28
LINC02171-201ENST00000508619 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
LINC02171-201ENST00000508619 LAMB1P07942 1786 aa16.77■□□□□ 0.27
LINC02171-201ENST00000508619 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.27
LINC02171-201ENST00000508619 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
LINC02171-201ENST00000508619 TRPA1O75762 1119 aa16.76■□□□□ 0.27
LINC02171-201ENST00000508619 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
LINC02171-201ENST00000508619 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
LINC02171-201ENST00000508619 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
LINC02171-201ENST00000508619 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
LINC02171-201ENST00000508619 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
LINC02171-201ENST00000508619 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
LINC02171-201ENST00000508619 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
LINC02171-201ENST00000508619 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
LINC02171-201ENST00000508619 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
LINC02171-201ENST00000508619 ZGPATQ8N5A5 531 aaKnown RBP16.75■□□□□ 0.27
LINC02171-201ENST00000508619 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
LINC02171-201ENST00000508619 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
LINC02171-201ENST00000508619 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
LINC02171-201ENST00000508619 CAPN15O75808 1086 aa16.74■□□□□ 0.27
LINC02171-201ENST00000508619 PRKG1Q13976 671 aa16.74■□□□□ 0.27
LINC02171-201ENST00000508619 HOOK2Q96ED9 719 aa16.74■□□□□ 0.27
LINC02171-201ENST00000508619 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
LINC02171-201ENST00000508619 MCOLN1Q9GZU1 580 aa16.73■□□□□ 0.27
LINC02171-201ENST00000508619 PHKA1P46020 1223 aa16.72■□□□□ 0.27
LINC02171-201ENST00000508619 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
LINC02171-201ENST00000508619 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
LINC02171-201ENST00000508619 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
LINC02171-201ENST00000508619 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
LINC02171-201ENST00000508619 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
LINC02171-201ENST00000508619 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
LINC02171-201ENST00000508619 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
LINC02171-201ENST00000508619 LDHBP07195 334 aaKnown RBP16.71■□□□□ 0.27
LINC02171-201ENST00000508619 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
LINC02171-201ENST00000508619 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
LINC02171-201ENST00000508619 TESPA1A2RU30 521 aaPredicted RBP16.7■□□□□ 0.26
LINC02171-201ENST00000508619 PRDX5P30044 214 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 TFCP2Q12800 502 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 DGKZQ13574 1117 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 RASGRF1Q13972 1273 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 POLA2Q14181 598 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
LINC02171-201ENST00000508619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC02171-201ENST00000508619 FAM163AQ96GL9 167 aaPredicted RBP16.7■□□□□ 0.26
LINC02171-201ENST00000508619 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
LINC02171-201ENST00000508619 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 ADORA1P30542 326 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 TIMM10P62072 90 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
LINC02171-201ENST00000508619 CTU1Q7Z7A3 348 aaKnown RBP16.69■□□□□ 0.26
LINC02171-201ENST00000508619 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 SLF2Q8IX21 1173 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 XAGE2Q96GT9 111 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 GAKO14976 1311 aa16.69■□□□□ 0.26
LINC02171-201ENST00000508619 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC02171-201ENST00000508619 DCAF15Q66K64 600 aa16.68■□□□□ 0.26
LINC02171-201ENST00000508619 SPTY2D1Q68D10 685 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms