RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 OVOS2A0A0J9YW53 1432 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 OVOS2Q6IE36 1432 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 SLIT3O75094 1523 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 GCP02774 474 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 MX2P20592 715 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 FGFR3P22607 806 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 ATP2B4P23634 1241 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 SRSF11Q05519 484 aaKnown RBP7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 DGKZQ13574 1117 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 RTN1Q16799 776 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 ZNF385CQ66K41 422 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 ACDQ96AP0 544 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 ATXN7L1Q9ULK2 861 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 GJA3Q9Y6H8 435 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 CPDO75976 1380 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 KIF24Q5T7B8 1368 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 AATKQ6ZMQ8 1374 aa7.4□□□□□ -1.22
HMGB1P44-201ENST00000508597 CRYBG1Q9Y4K1 1723 aa7.4□□□□□ -1.23
HMGB1P44-201ENST00000508597 PHRF1Q9P1Y6 1649 aaKnown RBP7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 ABCC6O95255 1503 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 SSFA2P28290 1259 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 RALBP1Q15311 655 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 MORC1Q86VD1 984 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 ZSCAN1Q8NBB4 408 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 USP20Q9Y2K6 914 aa7.39□□□□□ -1.23
HMGB1P44-201ENST00000508597 MAP2P11137 1827 aaKnown RBP7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 ABCA3Q99758 1704 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 TYRO3Q06418 890 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 NUTM2GQ5VZR2 741 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 ARHGEF25Q86VW2 580 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 SLC30A3Q99726 388 aa7.38□□□□□ -1.23
HMGB1P44-201ENST00000508597 NFAT5O94916 1531 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 RTL1A6NKG5 1358 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 TNFRSF10BO14763 440 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 BTLAQ7Z6A9 289 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 AEBP1Q8IUX7 1158 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 MYO19Q96H55 970 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
HMGB1P44-201ENST00000508597 COL14A1Q05707 1796 aaKnown RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 PARD3Q8TEW0 1356 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 OPLAHO14841 1288 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 ZBTB39O15060 712 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 INSM1Q01101 510 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 C11orf91Q3C1V1 193 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 CC2D1BQ5T0F9 858 aaKnown RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 MEX3CQ5U5Q3 659 aaKnown RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 PRDM11Q9NQV5 511 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 PHF24Q9UPV7 400 aa7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P44-201ENST00000508597 BLMP54132 1417 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 NWD2Q9ULI1 1742 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 KIAA0232Q92628 1395 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 FAM83GA6ND36 823 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 ANP32CO43423 234 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 ARHGEF15O94989 841 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 BMP4P12644 408 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 AMPHP49418 695 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 ZC3H6P61129 1189 aaKnown RBP7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 IP6K1Q92551 441 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 BRD7Q9NPI1 651 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 LTN1O94822 1766 aa7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
HMGB1P44-201ENST00000508597 INSRP06213 1382 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 FLT4P35916 1363 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 MAP3K19Q56UN5 1328 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 MYBBP1AQ9BQG0 1328 aaKnown RBP7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 COL18A1P39060 1754 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 SLIT2O94813 1529 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 TGFBR3LH3BV60 316 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 MICAL2O94851 1124 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 INPP5BP32019 993 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 PCBP4P57723 403 aaKnown RBP7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 MTMR3Q13615 1198 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 ZNF772Q68DY9 489 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 C16orf46Q6P387 395 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 PRKRIP1Q9H875 184 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 ANKIB1Q9P2G1 1089 aa7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 GNEQ9Y223 722 aaKnown RBP7.34□□□□□ -1.23
HMGB1P44-201ENST00000508597 LRP6O75581 1613 aa7.34□□□□□ -1.24
HMGB1P44-201ENST00000508597 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 LMO7Q8WWI1 1683 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 CDK12Q9NYV4 1490 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 PPP2R1AP30153 589 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms