RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 F8W031 263 aaPredicted RBP12□□□□□ -0.49
NEDD9-211ENST00000508546 SNAP23O00161 211 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 GPR153Q6NV75 609 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 G2E3Q7L622 706 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 BRI3BPQ8WY22 251 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 ELP3Q9H9T3 547 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 ZFYVE28Q9HCC9 887 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 STAP2Q9UGK3 403 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 MUC3AQ02505 3323 aa12□□□□□ -0.49
NEDD9-211ENST00000508546 TAF5LO75529 589 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 GTF2A2P52657 109 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-211ENST00000508546 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-211ENST00000508546 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 TEPSINQ96N21 525 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 FAM205AQ6ZU69 1335 aa11.99□□□□□ -0.49
NEDD9-211ENST00000508546 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
NEDD9-211ENST00000508546 RBM5P52756 815 aaKnown RBP eCLIP11.98□□□□□ -0.491e-19■■■■■ 58.1
NEDD9-211ENST00000508546 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 IFIT5Q13325 482 aaKnown RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 TWISTNBQ3B726 338 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
NEDD9-211ENST00000508546 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-211ENST00000508546 RAPGEFL1Q9UHV5 662 aa11.98□□□□□ -0.49
NEDD9-211ENST00000508546 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
NEDD9-211ENST00000508546 PRUNE2Q8WUY3 3088 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 FARP2O94887 1054 aaPredicted RBP11.97□□□□□ -0.49
NEDD9-211ENST00000508546 GNRH1P01148 92 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 COL9A1P20849 921 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 GJA8P48165 433 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 FLIIQ13045 1269 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 CCL15Q16663 113 aa11.97□□□□□ -0.49
NEDD9-211ENST00000508546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEDD9-211ENST00000508546 TLR2O60603 784 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 WDHD1O75717 1129 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 PRMT2P55345 433 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 FOXO4P98177 505 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 VGLL4Q14135 290 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 DZIP1LQ8IYY4 767 aaKnown RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 TDRD7Q8NHU6 1098 aaKnown RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.49
NEDD9-211ENST00000508546 JAG2Q9Y219 1238 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 CSADQ9Y600 493 aa11.96□□□□□ -0.49
NEDD9-211ENST00000508546 MGAMO43451 1857 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 RPTORQ8N122 1335 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 EVI5O60447 810 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 TNNI2P48788 182 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
NEDD9-211ENST00000508546 KIF22Q14807 665 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 GDF15Q99988 308 aa11.95□□□□□ -0.5
NEDD9-211ENST00000508546 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 GJB1P08034 283 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 CETPP11597 493 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 BCAMP50895 628 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 LDHAL6AQ6ZMR3 332 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
NEDD9-211ENST00000508546 IL16Q14005 1332 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 TCP10L2B9ZVM9 353 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-211ENST00000508546 CCL5P13501 91 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 CTGFP29279 349 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 HIBADHP31937 336 aaKnown RBP11.93□□□□□ -0.5
NEDD9-211ENST00000508546 CRKP46108 304 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 HDLBPQ00341 1268 aaKnown RBP11.93□□□□□ -0.5
NEDD9-211ENST00000508546 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 LMBR1LQ6UX01 489 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 FAM84BQ96KN1 310 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-211ENST00000508546 GUCD1Q96NT3 240 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 MYH13Q9UKX3 1938 aa11.93□□□□□ -0.5
NEDD9-211ENST00000508546 BTBD19C9JJ37 291 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 PLIN1O60240 522 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 BMP8BP34820 402 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 PLA2G5P39877 138 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 PPIL2Q13356 520 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 SNAPC2Q13487 334 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
NEDD9-211ENST00000508546 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
NEDD9-211ENST00000508546 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms