RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GEMIN8Q9NWZ8 242 aaKnown RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 RGS17Q9UGC6 210 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 RNF123Q5XPI4 1314 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 DISP2A7MBM2 1401 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CD163L1Q9NR16 1453 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 SRGAP3O43295 1099 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 DDNO94850 711 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 GMPSP49915 693 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 NBPF20Q3BBV1 942 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CLASRPQ8N2M8 674 aaKnown RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CCDC102AQ96A19 550 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 BRIP1Q9BX63 1249 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 FTOQ9C0B1 505 aaKnown RBP eCLIP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 SUPT16HQ9Y5B9 1047 aaKnown RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 KIF24Q5T7B8 1368 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 NCAPD2Q15021 1401 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 IL13P35225 146 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CCNA1P78396 465 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 GPSM2P81274 684 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TEX2Q8IWB9 1127 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 WDR66Q8TBY9 1149 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 PDCL3Q9H2J4 239 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CCDC88AQ3V6T2 1871 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 ATP10DQ9P241 1426 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 A6NJR5 290 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 GTPBP6O43824 516 aaPredicted RBP3.46□□□□□ -1.85
NEDD4-208ENST00000508342 NFIXQ14938 502 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 PUM3Q15397 648 aaKnown RBP3.46□□□□□ -1.85
NEDD4-208ENST00000508342 E2F4Q16254 413 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 CFAP100Q494V2 611 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 LRSAM1Q6UWE0 723 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 MAGEB6Q8N7X4 407 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 NUP133Q8WUM0 1156 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 CDK5RAP3Q96JB5 506 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 NAP1L5Q96NT1 182 aaPredicted RBP3.46□□□□□ -1.85
NEDD4-208ENST00000508342 ZBED2Q9BTP6 218 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 ZNRF3Q9ULT6 936 aa3.46□□□□□ -1.85
NEDD4-208ENST00000508342 PRAMEF22A3QJZ6 481 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 VGLL3A8MV65 326 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PSMD14O00487 310 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 FKTNO75072 461 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 BCAR3O75815 825 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 SYCP1Q15431 976 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 FAM161AQ3B820 660 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 TEX11Q8IYF3 940 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CAMTA1Q9Y6Y1 1673 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 USP19O94966 1318 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 M0QZ92 97 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 KRT18P05783 430 aaKnown RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 MYL3P08590 195 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PDE4BQ07343 736 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CCDC191Q8NCU4 936 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 RBM46Q8TBY0 533 aaKnown RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 GCC1Q96CN9 775 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 OTUD5Q96G74 571 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 ZNF341Q9BYN7 854 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 AP5M1Q9H0R1 490 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CRYBG1Q9Y4K1 1723 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 ZNF804BA4D1E1 1349 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PTPRCP08575 1304 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PI4KAP2A4QPH2 592 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 HIP1O00291 1037 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 NEFHP12036 1026 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 LBX1P52954 281 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 MLLT1Q03111 559 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 SNAPC2Q13487 334 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 DZIP1LQ8IYY4 767 aaKnown RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PI4KAP1Q8N8J0 262 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 ZBTB38Q8NAP3 1195 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 GBA2Q9HCG7 927 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 RCAN3Q9UKA8 241 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 LEMD3Q9Y2U8 911 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 TRIM17Q9Y577 477 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 KCPQ6ZWJ8 1503 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 RANBP6O60518 1105 aaKnown RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CYP19A1P11511 503 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 GTF2A2P52657 109 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CDC37L1Q7L3B6 337 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 MIGA2Q7L4E1 593 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 WDR63Q8IWG1 891 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 TBC1D22AQ8WUA7 517 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 BSDC1Q9NW68 430 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 DDX19BQ9UMR2 479 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 RAD50Q92878 1312 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 F6X3S4 739 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 FOSBP53539 338 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 RPS8P62241 208 aaKnown RBP3.46□□□□□ -1.86
NEDD4-208ENST00000508342 MFSD14BQ5SR56 506 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 KSR2Q6VAB6 950 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 CACTIN-AS1Q8N1I8 211 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 PPM1EQ8WY54 764 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 UBAC1Q9BSL1 405 aa3.46□□□□□ -1.86
NEDD4-208ENST00000508342 GLI3P10071 1580 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 NUP188Q5SRE5 1749 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 PTPDC1A2A3K4 754 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 TTC36A6NLP5 189 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 GCKRQ14397 625 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms