RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 TGFBR3LH3BV60 316 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 PLIN1O60240 522 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 ATF3P18847 181 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 VARSP26640 1264 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 GRNP28799 593 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 LMNB2Q03252 620 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 SUZ12Q15022 739 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 MRM1Q6IN84 353 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 PDE12Q6L8Q7 609 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 TPTE2Q6XPS3 522 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 BNC2Q6ZN30 1099 aaPredicted RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 FAM196AQ6ZSG2 479 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 RNF180Q86T96 592 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 NBPF15Q8N660 670 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 TTC8Q8TAM2 541 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 NINJ1Q92982 152 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 HSH2DQ96JZ2 352 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 OXCT2Q9BYC2 517 aaPredicted RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 ASPSCR1Q9BZE9 553 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 ENAMQ9NRM1 1142 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 NXF1Q9UBU9 619 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 RTCBQ9Y3I0 505 aaKnown RBP5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 RPS6KL1Q9Y6S9 549 aa5.22□□□□□ -1.57
ATP2C1-213ENST00000508297 ALG1L2C9J202 215 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 IFRD1O00458 451 aaPredicted RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 WNT7AO00755 349 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 AKAP10O43572 662 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 PDE8AO60658 829 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 RASGRP1O95267 797 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 F13A1P00488 732 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 MYL1P05976 194 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 PMLP29590 882 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 GUCY2FP51841 1108 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 DHX9Q08211 1270 aaKnown RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 FXNQ16595 210 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 C10orf62Q5T681 223 aaPredicted RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 TTC39BQ5VTQ0 682 aaPredicted RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 KIAA0319Q5VV43 1072 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 PEAR1Q5VY43 1037 aaPredicted RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 SV2BQ7L1I2 683 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 NPAS3Q8IXF0 933 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 MYO1HQ8N1T3 1032 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 SAMD3Q8N6K7 520 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 SUSD3Q96L08 255 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 CDK15Q96Q40 435 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 EHD4Q9H223 541 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 CAAP1Q9H8G2 361 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 ABCB6Q9NP58 842 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 ZIM2Q9NZV7 527 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 ANKIB1Q9P2G1 1089 aa5.21□□□□□ -1.58
ATP2C1-213ENST00000508297 HMGB1P1B2RPK0 211 aaPredicted RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 PRPF3O43395 683 aaKnown RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 DDAH1O94760 285 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 NR3C2P08235 984 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 SMPD1P17405 629 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 INPP5BP32019 993 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 MCM4P33991 863 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 GMPRP36959 345 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 CLCQ05315 142 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 PABPC4Q13310 644 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 HDAC1Q13547 482 aaPredicted RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 PERM1Q5SV97 790 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 C6orf15Q6UXA7 325 aaPredicted RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 KSR2Q6VAB6 950 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 RUFY4Q6ZNE9 571 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 STRA8Q7Z7C7 330 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 LSRQ86X29 649 aaPredicted RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 PPARGC1BQ86YN6 1023 aaKnown RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 CCDC116Q8IYX3 515 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 SYNPOQ8N3V7 929 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 SCYL1Q96KG9 808 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 FERD3LQ96RJ6 166 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 CRBNQ96SW2 442 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 AVENQ9NQS1 362 aaPredicted RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 NOB1Q9ULX3 412 aaKnown RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 FNDC3AQ9Y2H6 1198 aaKnown RBP5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 TLL2Q9Y6L7 1015 aa5.2□□□□□ -1.58
ATP2C1-213ENST00000508297 TMEM238LA0A1B0GVL6 79 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 KIF4AO95239 1232 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 FGAP02671 866 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 CYP2E1P05181 493 aaPredicted RBP5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 RLBP1P12271 317 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 CDC27P30260 824 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 VEGFBP49765 207 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 CLN3Q13286 438 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 BRD3Q15059 726 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 VPS72Q15906 364 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 PPP2R5EQ16537 467 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 CT47A1Q5JQC4 288 aaPredicted RBP5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 AKAP4Q5JQC9 854 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 SLC4A10Q6U841 1118 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 AGMOQ6ZNB7 445 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 LHFPL2Q6ZUX7 228 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 FAM9BQ8IZU0 186 aa5.19□□□□□ -1.58
ATP2C1-213ENST00000508297 AFAP1L2Q8N4X5 818 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms