RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NBPF26B4DH59 902 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 FGAP02671 866 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 CMA1P23946 247 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 ETF1P62495 437 aaKnown RBP15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 NBPF10Q6P3W6 841 aaKnown RBP15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 BRAPQ7Z569 592 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 MB21D2Q8IYB1 491 aaPredicted RBP15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 NBPF15Q8N660 670 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 TRPM3Q9HCF6 1732 aaPredicted RBP15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 KIF1AQ12756 1690 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 EYA2O00167 538 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 CYP27B1O15528 508 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 ADORA1P30542 326 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 TRIM65Q6PJ69 517 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 IFNL2Q8IZJ0 200 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 DENND2AQ9ULE3 1009 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 GLI3P10071 1580 aa15.54■□□□□ 0.08
SNCAIP-209ENST00000508017 TMEM232C9JQI7 657 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 CPLX1O14810 134 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 IMMTQ16891 758 aaKnown RBP15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 NKX2-3Q8TAU0 364 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 IKBKBO14920 756 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 PNMA6AP0CW24 399 aaPredicted RBP15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 PNOCQ13519 176 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 TAF3Q5VWG9 929 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 CHMP4CQ96CF2 233 aa15.53■□□□□ 0.08
SNCAIP-209ENST00000508017 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 SYKP43405 635 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 PLA2G4AP47712 749 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 UBASH3AP57075 661 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 SCARF1Q14162 830 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 SHC4Q6S5L8 630 aa15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
SNCAIP-209ENST00000508017 PHLPP2Q6ZVD8 1323 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 NRDCO43847 1150 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 DHX16O60231 1041 aaKnown RBP15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 SERPINC1P01008 464 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 RXRAP19793 462 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 SLC39A14Q15043 492 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 NOL10Q9BSC4 688 aaKnown RBP15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 UTP14AQ9BVJ6 771 aaKnown RBP15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.07
SNCAIP-209ENST00000508017 ZBTB22O15209 634 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 CFAP100Q494V2 611 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 PI16Q6UXB8 463 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 REXO1L1PQ8IX06 675 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 PODXL2Q9NZ53 605 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 LAMB4A4D0S4 1761 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 CLIC6Q96NY7 704 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 EPC1Q9H2F5 836 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 TMX1Q9H3N1 280 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 ZBTB3Q9H5J0 574 aa15.51■□□□□ 0.07
SNCAIP-209ENST00000508017 NUP188Q5SRE5 1749 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 CABP4P57796 275 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 MYL5Q02045 173 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 HSP90AA4PQ58FG1 418 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 RALYLQ86SE5 291 aaKnown RBP15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 ANKLE2Q86XL3 938 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 FAM177A1Q8N128 213 aaPredicted RBP15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 NCOA7Q8NI08 942 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 UBXN4Q92575 508 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 HPSEQ9Y251 543 aa15.5■□□□□ 0.07
SNCAIP-209ENST00000508017 TADA3O75528 432 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 SEC31AO94979 1220 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 ZRANB2O95218 330 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 VPS37DQ86XT2 251 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 VSTM4Q8IW00 320 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 FANCLQ9NW38 375 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 ECM29Q5VYK3 1845 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 PTPAQ15257 358 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 TICAM2Q86XR7 235 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 MNS1Q8NEH6 495 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 XAGE2Q96GT9 111 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 TIGD1Q96MW7 591 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 CCDC85AQ96PX6 553 aaPredicted RBP15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 INTS13Q9NVM9 706 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 PARP3Q9Y6F1 533 aa15.49■□□□□ 0.07
SNCAIP-209ENST00000508017 CSB-PGBD3P0DP91 1061 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 ZAP70P43403 619 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 PDE4BQ07343 736 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 TMEM139Q8IV31 216 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 FOXP4Q8IVH2 680 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 PHKBQ93100 1093 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 SENP2Q9HC62 589 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 CEP126Q9P2H0 1117 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms